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Table 2 Suggestive SNPs

From: Genome-wide association study identified ATP6V1H locus influencing cerebrospinal fluid BACE activity

SNP

Chr

Position

SNP Type

Closest RefSeq gene

Gene name

P value

rs2507780

8

100588738

intron

SNX31

sorting nexin 31

3.15 × 10−6

rs1866007

15

60526051

intron

RORA-AS1

RORA

RAR related orphan receptor A

6.02 × 10−6

rs7903757

10

71552620

intron

CDH23

LOC105378355

cadherin related 23

9.21 × 10−6

rs6473895

8

53850344

upstream variant 2 KB

RGS20

regulator of G-protein signaling 20

8.42 × 10−6

rs4075903

11

40186373

intron

LRRC4C

leucine rich repeat containing 4C

9.34 × 10−6

rs9693226

8

53540570

 

MAPK6PS1

mitogen-activated protein kinase 6 pseudogene 1

7.38 × 10−6

rs1900511

10

71559814

intron

LOC105378355

 

9.32 × 10−6

  1. SNP single nucleotide polymorphism, Chr chromosome