Table 1 HealthIron SNPs selected for typing by gene, incomplete cover means not all tag SNPs were included.
From: SNP selection for genes of iron metabolism in a study of genetic modifiers of hemochromatosis
No. SNPs | HUGO | Full or other name(s) | Chr | |
|---|---|---|---|---|
16 | * | ACO1 | IRP1; IRE-binding protein; Aconitase 1 | 9p21.2 |
1 | CALR | Calreticulin | 19p13.13 | |
14 | CD163 | Hemoglobin scavenger receptor | 12p13.31 | |
25 | CP | Ceruloplasmin | 3q25.1 | |
29 | CUBN | Cubulin (incomplete cover) | 10p13 | |
27 | * | CYBRD1 | Dcytb | 2q31.1 |
6 | DHCR7 | Smith-Lemli-Opitz syndrome | 11q13.4 | |
3 | EXOC6 | SEC15 (incomplete cover) | 10q23.33 | |
16 | FLVCR | Feline leukemia virus subgroup C receptor | 1q32.3 | |
7 | * | FTH1 | H-ferritin | 11q12.3 |
1 | FTL | L-Ferritin | 19q13.33 | |
7 | FXN | Frataxin | 9q21.11 | |
2 | GAST | Gastrin | 17q21.2 | |
1 | GSTP1 | GSTP1 I105V | 11q13.2 | |
5 | * | HAMP | Hepcidin | 19q13.12 |
5 | * | HCP1 | MGC9564, heme carrier protein 1 | 17q11.2 |
18 | * | HEPH | Hephaestin | Xq12 |
9 | HEPHL1 | Hephaestin-like 1; Eleutherin | 11q21 | |
7 | HFE | Hemochromatosis | 6p22.2 | |
4 | * | HFE2 | Hemojuvelin | 1q25 |
10 | HMOX1 | HO-1Hemoxygenase 1 | 22q12.3 | |
2 | HMOX2 | HO-2 Hemoxygenase 2 | 16p13.3 | |
2 | HP | Haptoglobin | 16q22.2 | |
6 | HPX | Hemopexin | 11p15.4 | |
18 | * | IREB2 | IRP2 IRE-binding protein 2 | 15q24.1 |
1 | * | PGRMC1 | Progesterone receptor membrane component 1 | Xq24 |
3 | * | PGRMC2 | Progesterone receptor membrane component 2 | 4q28.2 |
13 | SLC11A2 | Divalent metal-ion transporter 1; DCT1 | 12q13.12 | |
20 | SLC25A37 | Frascati | 8p21.2 | |
12 | SLC40A1 | Ferroportin; IREG1; MTP1 | 2q32.2 | |
11 | STEAP3 | nm1058 (incomplete cover) | 2q14.2 | |
45 | * | TF | Transferrin | 3q22.1 |
6 | * | TFR2 | Transferrin receptor 2 | 7q22.1 |
30 | * | TFRC | Transferrin receptor 1 | 3q29 |
2 | TNF | TNFalpha | 6p21.33 | |
384 |