Haplotype | Alleles | Frequency | P-value | Frequency | P-value | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
rs242559 | rs242557 | rs3785883 | rs2471738 | H1/H2 | rs7521 | Controls | sCJD | UK sCJD | UK vCJD | |||
H1e | A | G | G | C | G | A | 0.25 | 0.26 | ref | 0.24 | 0.2 | 0.51 |
H2a | C | G | G | C | A | G | 0.23 | 0.22 | 0.64 | 0.28 | 0.31 | ref |
H1c | A | A | G | T | G | G | 0.12 | 0.15 | 0.46 | 0.16 | 0.1 | 0.4 |
H1d | A | A | G | C | G | A | 0.13 | 0.1 | 0.08 | 0.07 | 0.16 | 0.18 |
H1f | A | G | A | C | G | G | 0.05 | 0.05 | 0.88 | 0.08 | 0.02 | 0.04 |
H1g | A | A | G | C | G | G | 0.05 | 0.05 | 0.91 | _ | _ | _ |
H1h | A | G | A | C | G | A | 0.04 | 0.04 | 0.64 | _ | _ | _ |
H1i | A | A | A | C | G | A | 0.03 | 0.03 | 0.68 | _ | _ | _ |
H1j | A | A | A | T | G | G | 0.03 | 0.02 | 0.45 | 0.01 | 0.07 | 0.01 |
H1b | A | G | G | C | G | G | 0.02 | 0.02 | 0.55 | _ | _ | _ |