SNPs | Allele frequency | Genotype frequency | Association | |||
---|---|---|---|---|---|---|
DM F (* n) | CRI F (* n) | DM F (** n) | CRI F (** n) | Allele (df = 1) | Genotype (df = 2) | |
TGFβ1 G>A (-800) | G = 0.93 (418) A = 0.07 (32) | G = 0.91 (356) A = 0.09 (72) | GG = 0.87 (196) GA = 0.12 (27) AA = 0.01 (3) | GG = 0.84(165) GA = 0.15 (29) AA = 0.01 (2) | χ2 = 0.60; P = 0.44 | χ2 = 1.16; P = 0.56 |
TGFβ1 C>T (-509) | C = 0.875 (388) T = 0.125 (112) | C = 0.84 (330) T = 0.16 (124) | CC = 0.77 (171) CT = 0.21 (47) TT = 0.02 (4) | CC = 0.72 (141) CT = 0.24 (47) TT = 0.04 (8) | χ2 = 1.24; P = 0.27 | χ2 = 1.23; P = 0.54 |
TNFα G>A (-308) Promoter | G = 0.93 (416) A = 0.07 (32) | G = 0.96 (376) A = 0.04 (16) | GG = 0.87 (195) GA = 0.12 (27) AA = 0.01 (2) | GG = 0.91 (178) GA = 0.08 (16) AA = 0.01 (2) | χ2 = 2.31; P = 0.13 | χ2 = 2.43; P = 0.12 |
CCR2 C>T Val64Ile | C = 0.91 (410) T = 0.09 (40) | C = 0.94 (368) T = 0.06 (24) | CC = 0.84 (189) CT = 0.15 (34) TT = 0.01 (2) | CC = 0.90 (176) CT = 0.09 (18) TT = 0.01 (2) | χ2 = 2.73; P = 0.10 | χ2 = 2.87; P = 0.24 |
CCR 5G>A (59029) | G = 0.46 (208) A = 0.54 (242) | G = 0.38 (148) A = 0.62 (244) | GG = 0.21 (47) GA = 0.49 (111) AA = 0.30 (67) | GG = 0.14 (27) GA = 0.48 (94) AA = 0.38 (75) | χ2 = 5.13; P = 0.02 | χ2 = 5.22; P = 0.07 |