Table 3 Comparisons of GeneChip^® and RT-PCR expression fold changes in mutant versus wild-type MECP2 expressing clones for 11 differentially expressed genes

GC

0.91

5.80

31.50

3.90

0.113

RT

0.89

4.81

11.63

3.49

0.094

GC

2.00

11.80

2.00

0.37

0.228

RT

2.03

15.87

2.97

0.72

0.199

GC

1.80

1.40

2.30

0.77

0.210

RT

1.30

1.69

1.76

0.94

0.112

GC

1.00

2.40

6.10

3.50

0.081

RT

1.36

4.77

20.10

24.15

0.058

GC

1.20

1.30

2.10

2.00

0.047

RT

1.36

3.25

3.59

2.16

0.029

GC

3.20

5.50

15.10

3.80

0.016

RT

2.30

2.10

9.80

3.10

0.039

GC

2.00

2.20

1.90

1.40

0.008

RT

1.22

1.60

2.07

1.30

0.040

GC

5.90

0.12

2.60

4.40

0.609

RT

3.00

0.23

1.86

11.79

0.467

GC

0.28

0.37

0.02

0.10

0.045

RT

0.18

0.25

0.05

0.09

0.011

GC

0.53

0.42

0.56

0.27

0.014

RT

0.63

0.29

1.25

0.42

0.157

GC

0.32

2.80

0.11

0.50

0.347

RT

0.20

2.81

0.10

0.42

0.284