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Table 1 Primers used for amplification of der(2) and der(8) junction fragments

From: New case of trichorinophalangeal syndrome-like phenotype with a de novo t(2;8)(p16.1;q23.3) translocation which does not disrupt the TRPS1 gene

Fragment

Designation

Primer sequence (5′→3′)

Primer localization a

Annealing T(°C)

PCR size (bp)

Der(8) junction fragment

AF130342-3FW

CCTTCTAGAGCAAATTCTTTTAGACCTTGA

chr8:116,981,340-116,981,369

62.4

632

AC007131-5FW

CTCATGGTGTAGAATAGAAGCAGCAAGT

chr2:59,567,411-59,567,438

Der(2) junction fragment

AF130342-1RW

GTTGACATCAGGACTTCAGGTAAATGAA

chr8:116,981,900-116,981,927

61.4

701

AC007131-4RW

AATTTCTCCTTTATTCCTCTCCCCTTTC

chr2:59,568,122-59,568,149

  1. aPrimer physical localization is based on GRCh37/hg19 human genome assembly.