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Table 2 Characteristics of the novel MYO15A mutations detected in this study

From: Whole-exome sequencing identifies MYO15A mutations as a cause of autosomal recessive nonsyndromic hearing loss in Korean families

Family

Genomic positions (Hg19)

Nucleotide change

Amino acid change

Location

Domain

Controls

Evolutionary conservation

In silico analysis

        

SIFT1

PolypPhen-22

MUpro3

Pathologic variant

SR-903

Chr17:18035881

c.4320 + 1G

IVS11 + 1

Intron

Motor

0/409

Yes

-

-

-

SR-903

Chr17:18049349

c.G6437A

p.R2146Q

Exon 29

MyTH4

0/409

Yes

0

0.99

-0.743

Variants with uncertain pathogenicity

SR-285

Chr17:18049394

c.C6482T

p.S2161F

Exon 29

MyTH4

0/409

Yes

0

1

-0.543

  1. 1 For SIFT, prediction of a change being deleterious (<0.05) or tolerated.
  2. 2 For PolyPhen-2, prediction of a change being deleterious (>0.85), possibly deleterious (0.15–0.85) or benign (<0.15).
  3. 3 For MUpro, prediction of a change that decreases protein stability (score <0) or increases protein stability (score >0), with a confidence score between -1 and 1.
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