Skip to main content

Advertisement

Table 2 Different size of amplicons originated from different SNPs and genotypes

From: Allele-specific polymerase chain reaction for the detection of Alzheimer’s disease-related single nucleotide polymorphisms

Gene Genotype Assay Interacted primers Size of amplicons (bp)
Forward Reverse
BIN1 AA Wild type and variant type BIN1-Fc BIN1-Rc 767
BIN1-Fas-W 308
AG BIN1-Fc 767
BIN1-Fas-W 308
BIN1-Fc BIN1-Ras-V 492
GG BIN1-Rc 767
BIN1-Ras-V 492
CLU CC Wild type and variant type CLU-Fc CLU-Rc 685
CLU-Fas-W 419
CT CLU-Fc 685
CLU-Fas-W 419
CLU-Fc CLU-Ras-V 308
TT CLU-Fc CLU-Rc 685
CLU-Fc CLU-Ras-V 308
ABCA7 TT Wild type ABCA7-Fc ABCA7-Rc 846
ABCA7-Fas-W 369
Variant type ABCA7-Fc 846
TG Wild type ABCA7-Fc 846
ABCA7-Fas-W 369
Variant type ABCA7-Fc 846
ABCA7-Fas-V 369
GG Wild type ABCA7-Fc 846
Variant type ABCA7-Fc 846
ABCA7-Fas-V 369
CR1 GG Wild type CR1-Fc CR1-Rc 664
CR1-Ras-W 256
Variant type CR1-Rc 664
GA Wild type CR1-Rc 664
CR1-Ras-W 256
Variant type CR1-Rc 664
CR1-Fas-V 448
AA Wild type CR1-Fc 664
Variant type CR1-Fc 664
CR1-Fas-V 448
PICALM GG Wild type PICALM-Fc PICALM-Rc 718
PICALM-Ras-W 286
Variant type PICALM-Rc 718
GA Wild type PICALM-Rc 718
PICALM-Ras-W 286
Variant type PICALM-Rc 718
PICALM-Fas-V 481
AA Wild type PICALM-Fc 718
Variant type PICALM-Fc 718
PICALM-Fas-V 481