Single nucleotide polymorphisms in thymic stromal lymphopoietin gene are not associated with allergic rhinitis susceptibility in Chinese subjects

Table 2 SNPs genotyped for TSLPgene

Gene: locus and OMIMNo.^a	No.	SNP_ID	Chromosome Position^b	Intermarker distances (bp)	Genic location	Base Change	MAF^c			P^f	P value for HWE^gtest
Gene: locus and OMIMNo.^a	No.	SNP_ID	Chromosome Position^b	Intermarker distances (bp)	Genic location	Base Change	NCBI^d	Case^e	Control	P^f	P value for HWE^gtest
	1	rs1545169	110427275	——	5′ near gene	T/G	0.476	0.292	0.278	0.6928	<0.0000
	2	rs764917	110428406	1131	5′ near gene	A/C	0.205	0.284	0.289	0.5036	0.0004
	3	rs12653736	110428526	120	5′ near gene	G/T	0.062	0.104	0.113	0.8689	0.6270
	4	rs1837253	110429771	1245	5′ near gene	T/C	0.389	0.467	0.460	0.5430	0.7337
	5	rs12654933	110430654	883	5′ near gene	C/A	0.244	0.154	0.144	0.7575	0.8902
	6	rs10455025	110432898	2244	5′ near gene	A/C	0.067	0.050	0.048	0.9790	0.3650
TSLP: 5q22.1	7	rs11466741	110436604	3706	Intron 2	C/T	0.211	0.313	0.329	0.8127	0.2428
	8	rs13156086	110443368	6764	3′ near gene	A/C	0.144	0.239	0.251	0.6890	0.7148
	9	rs6886755	110443500	132	3′ near gene	G/T	0.089	0.077	0.073	0.9559	0.5559
	10	rs252706	110444759	1259	3′ near gene	G/A	0.337	0.327	0.337	0.8165	0.0635
	11	rs2416259	110447641	2882	3′ near gene	T/C	0.411	0.369	0.366	0.6565	0.1416

a. OMIM, Online Mendelian Inheritance in Man (http://www.ncbi.nlm.nih.gov/Omim).
b. SNP position in Chromosome 5 in the NCBIdbSNP database (http://www.ncbi.nlm.nih.gov/SNP).
c. MAF, minor allele frequency.
d. MAF for Chinese in the NCBIdb SNPs database.
e. allergic rhinitis subjects.
f. P value for difference in allele distributions between allergic rhinitis and control subjects.
g. HWE, Hardy–Weinberg equilibrium.

ISSN: 1471-2350