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Table 2 Characteristics of CNVs detected using QuantiSNP

From: Cheek swabs, SNP chips, and CNVs: Assessing the quality of copy number variant calls generated with subject-collected mail-in buccal brush DNA samples on a high-density genotyping microarray

 

Bayes Factor 10

Bayes Factor 30

Bayes Factor 50

 

Blood

Brush

Blood

Brush

Blood

Brush

Mean # CNVS per subject

314.0

385.7

151.5

183.0

103.1

109.1

Size of CNVs (kb)

Mean

15.9

16.2

19.9

19.0

19.4

19.0

25th percentile

1.0

1.1

1.0

1.1

1.1

1.2

Median

2.1

2.1

1.9

2.1

1.9

2.0

75th percentile

6.0

5.8

4.4

4.8

3.9

4.2

Size of CNVs (probes)

Mean

15.9

16.6

17.2

18.4

17.9

17.0

25th percentile

12.0

12.0

13.0

14.0

14.0

14.0

Median

16.0

16.0

17.0

17.0

17.0

17.0

75th percentile

18.0

18.0

18.0

18.0

18.0

18.0