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Table 1 The eight transcript SNPs studied in this report

From: Allelic expression analysis of the osteoarthritis susceptibility locus that maps to MICAL3

SNP Position on chr. 22 on NCBI genome build 37.3 Alleles MAF* Gene Location of SNP in gene Pairwise linkage disequilibrium relative to the OA associated SNP rs2277831
       D' r2
rs4488761 18209613 A/G 0.46 BCL2L13 3'UTR/exonic^ 0.11 0.00
rs2587100 18210704 C/G 0.40 BCL2L13 3'UTR 0.02 0.00
rs9967 18211205 C/T 0.38 BCL2L13 3'UTR 0.21 0.01
rs11538 18220831 T/C 0.18 BID 3'UTR/exonic^ 0.12 0.00
rs5992854 18300240 T/C 0.32 MICAL3 exonic 1.00 0.71
rs11917 18343011 G/T 0.41 MICAL3 3'UTR 0.76 0.11
rs1057721 18343843 G/A 0.41 MICAL3 3'UTR 0.78 0.13
rs4819639 18347127 C/T 0.29 MICAL3 3'UTR 0.74 0.06
  1. *Minor allele frequency in Europeans (dbSNP http://www.ncbi.nlm.nih.gov/projects/SNP/ ^Multiple predicted splice isoforms result in different potential locations in the transcript