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Table 4 The number of scoring SNPs that fall into each p-value threshold based on the discovery set is shown.

From: Recent methods for polygenic analysis of genome-wide data implicate an important effect of common variants on cardiovascular disease risk

Target GWAS Statistics for Each Scoring SNP Set

 

P-Value Threshold Range

Number of SNPs

P-Value

Adjusted R2

> 0-.1

24843

0.4974

0

> .1-.2

24201

0.8096

0

> .2-.3

24329

0.00393*

0.004177

> .3-.4

23962

0.971

0

> .4-.5

24269

0.032033*

0.002056

> .5-.6

24500

0.06449

0.001383

> .6-.7

24429

0.7129

0

> .7-.8

24429

0.23410

0.0002382

> .8-.9

24397

0.444

0

> .9-1

24508

0.7921

0

  1. Significant ranges and their respective p-values are highlighted.