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Table 3 Ten most significant SNPs associated with Framingham Risk Score using GWAS

From: Recent methods for polygenic analysis of genome-wide data implicate an important effect of common variants on cardiovascular disease risk

SNP Rank

SNP ID

Region

Gene

Beta

P-value

1

rs17584191

5q23.2

Intergenic; flanking LMNB1

0.09579

1.866e-05

2

rs17051776

13q13

NBEA

-0.28380

2.987e-05

3

rs483487

3q26.31

NLGN1

0.11820

3.239e-05

4

rs215935

6q14-q15

Intergenic; flanking TBX18

-0.08192

4.258e-05

5

rs1862523

5p14-p13

Intergenic; flanking NPR3

-0.08753

4.610e-05

6

rs2111202

7q3

NRCAM

0.09009

5.237e-05

7

rs12611756

2p12-p11.1

CTNNA2

0.08251

5.875e-05

8

rs1491609

3p13

Intergenic; flanking FOXP1

-0.08143

5.952e-05

9

rs1346949

18q21.33

Intergenic; flanking PIGN

-0.08592

6.730e-05

10

rs17205291

1q42

Intergenic; flanking KIAA1804

0.10680

6.860e-05

  1. No single SNP was significant at the genome-wide level after multiple testing correction. SNPs that appear to replicate previous findings are highlighted.