|
MAPT
|
NSF
|
WNT3
|
Ashkenazi Jewish
|
NINDS
|
CIDR/Pankratz et al 2009
|
---|
Single point
|
rs1981997
|
rs183211
|
rs415430
|
P-value
|
OR
|
95% CI
|
P-value
|
OR
|
95% CI
|
P-value
|
OR
|
95% CI
|
|
A
| | |
0.0009118
|
0.58
|
0.42-0.90
|
0.07504
|
0.86
|
0.73-1.01
|
0.0001569
|
0.72
|
0.61-0.86
|
| |
T
| |
6.68 × 10-5
|
0.54
|
0.40-0.73
|
0.1015
|
0.87
|
0.74-1.02
|
0.001375
|
0.77
|
0.65-0.90
|
| | |
C
|
8.59 × 10-5
|
0.54
|
0.30-0.74
|
0.002397
|
0.77
|
0.65-0.91
| |
N/A
| |
2-mer
|
rs1981997
|
rs183211
|
rs415430
|
P-value
|
Freq. Cases
|
Freq. Controls
|
P-value
|
Freq. Cases
|
Freq. Controls
|
P-value
|
Freq. Cases
|
Freq. Controls
|
|
G
|
C
| |
0.00034
|
0.7743
|
0.6657
|
0.2634
|
0.7654
|
0.7491
|
0.0003
|
0.791
|
0.7386
|
|
A
|
C
| |
0.2118
|
0.0187
|
0.0084
|
0.1986
|
0.0217
|
0.0157
|
0.1059
|
0.0128
|
0.0198
|
|
G
|
T
| |
0.3211
|
0.0466
|
0.0618
|
0.2344
|
0.0444
|
0.0364
|
0.9238
|
0.0326
|
0.0332
|
|
A
|
T
| |
0.00016
|
0.1604
|
0.264
|
0.0214
|
0.1685
|
0.1989
|
0.0007
|
0.1636
|
0.2084
|
| |
T
|
C
|
0.00023
|
0.1559
|
0.2558
|
0.0145
|
0.1647
|
0.1967
| | | |
| |
C
|
C
|
0.2912
|
0.0456
|
0.0617
|
0.0191
|
0.0081
|
0.0169
| | | |
| |
T
|
T
|
0.2408
|
0.0512
|
0.0701
|
0.2133
|
0.0482
|
0.0395
| | | |
| |
C
|
T
|
1.91 × 10
-5
|
0.7473
|
0.6125
|
0.0269
|
0.7790
|
0.7469
| |
N/A
| |
3-mer
|
A
|
T
|
C
|
0.00018
|
0.156
|
0.2585
|
0.0133
|
0.1626
|
0.1951
| | | |
|
G
|
C
|
C
|
0.3544
|
0.0445
|
0.0584
|
0.0134
|
0.0081
|
0.0175
| | | |
|
G
|
T
|
T
|
0.2446
|
0.0450
|
0.0628
|
0.2758
|
0.0422
|
0.0350
| | | |
|
A
|
C
|
T
|
0.1172
|
0.0194
|
0.0066
|
0.2187
|
0.0222
|
0.0163
| | | |
|
G
|
C
|
T
|
0.00014
|
0.7351
|
0.6137
|
0.0518
|
0.7649
|
0.7361
| |
N/A
| |
- *Adjusted for age and sex. Age refers to age at onset for affected individuals, and age at examination for unaffected individuals. OR: odds ratios, 95% CI: 95% confidence interval; P-values for allelic/haplotype association; Single point shows the protective allele of each SNP; N/A, SNP rs415430 is not available in PD/CIDR data.