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Table 1 Analysis of rs1534283 and rs1534284 variants (Myg1 Arg4Gln) in human EST (mRNA) and genomic DNA sequences from NCBI and UCSC databases.

From: Promoter polymorphism -119C/G in MYG1 (C12orf10) gene is related to vitiligo susceptibility and Arg4Gln affects mitochondrial entrance of Myg1

 

Fourth amino acid

Database/Accession

Sequence coding eight first amino acids from MYG1initial ATG

Source of mRNA

mRNA sequences

Gln

[GenBank:NM_021640]

atgggacaccaattcctgcgcggc

 
 

Gln

[GenBank:CR626228.1]

atgggacaccaattcctgcgcggc

fetal brain

 

Gln

[GenBank:CR614390.1]

atgggacaccaattcctgcgcggc

neuroblastoma

 

Arg

[GenBank:BC051871]

atgggacaccgcttcctgcgcggc

 
 

Arg

[GenBank:BC013956]

ccgcttcctgcgcggc

 
 

Arg

[GenBank:AF289485]

atgggacaccgcttcctgcgcggc

melanocytes

Genomic DNA

Gln

[GenBank:NT_029419]

ATGGGACACCAATTCCTGCGCGGC

 
 

Gln

[GenBank:NC_000012]

ATGGGACACCAATTCCTGCGCGGC

 
 

Gln

UCSC database

ATGGGACACCAATTCCTGCGCGGC

 
 

Arg

[GenBank:NW_925395.1]

ATGGGACACCGCTTCCTGCGCGGC

 
  1. First (ATG) and fourth (CAA or CGC) amino acids are underlined.