Gene | SNP | Minor allele frequency in controls | Linkage disequilibrium in controls | |||||||
---|---|---|---|---|---|---|---|---|---|---|
North Europe | North Spain | Difference (p) | With | North Europe | North Spain | |||||
D' | r 2 | D' | r 2 | |||||||
DBH | rs1611115 | -1021C/T | 20.7% (T) | 19.7% (T) | 0.47 | rs5320 | 0.994 | 0.015 | 0.994 | 0.017 |
rs 5320 | Exon 3 Ala197Thr | 5.3% (A, Thr) | 6.0% (A, Thr) | 0.38 | rs1611131 | 0.257 | 0.002 | 0.393 | 0.003 | |
rs1611131 | Intron 10 A/G | 29.4% (G) | 24.5% (G) | 0.002 | rs1611115 | 0.295 | 0.055 | 0.250 | 0.047 | |
IL1A | rs1800587 | -889C/T | 29.2% (T) | 25.4% (T) | 0.01 | rs17561 | 0.999 | 0.994 | 0.989 | 0.971 |
rs17561 | Exon 5 Ala114Ser | 29.2% (T, Ser) | 25.6% (T, Ser) | 0.02 | rs3783550 | 0.997 | 0.185 | 0.999 | 0.145 | |
rs3783550 | Intron 6 A/C | 31.2% (C) | 29.8% (C) | 0.39 | rs1800587 | 0.994 | 0.185 | 0.999 | 0.144 | |
IL6 | rs1800795 | -174G/C | 41.1% (C) | 32.8% (C) | 4 × 10 -7 | rs2069837 | 0.999 | 0.055 | 0.998 | 0.049 |
rs2069837 | Intron 2 A/G | 7.3% (G) | 9.3% (G) | 0.03 |