From: Functional and genetic analysis in type 2 diabetes of Liver X receptor alleles – a cohort study
SNP | Call | HWE | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Name | Position | Allelea | #11b | #12 | #22 | %1c | %2 | rate % | P valued | O.R. ± C.I.e | |
LXRA | |||||||||||
rs4752822 | 5' | T>C | NDg | 522 | 332 | 53 | 76 | 24 | 96 | 0.93 | 1.04 [0.89–1.21] |
T2Dg | 537 | 360 | 57 | 75 | 25 | ||||||
rs61896015 | intron 2 | C>A | ND | 711 | 180 | 16 | 88 | 12 | 97 | 0.79 | 1.13 [0.93–1.37] |
T2D | 729 | 221 | 15 | 87 | 13 | ||||||
rs12221497 | intron 2 | G>A | ND | 718 | 180 | 17 | 88 | 12 | 97 | 0.69 | 1.09 [0.90–1.33] |
T2D | 727 | 216 | 13 | 87 | 13 | ||||||
rs2279239 | intron 4 | T>C | ND | 518 | 328 | 52 | 76 | 24 | 97 | 0.94 | 1.03 [0.89–1.20] |
T2D | 549 | 355 | 60 | 75 | 25 | ||||||
rs2279238 | exon 5 | C>T | ND | 715 | 195 | 12 | 88 | 12 | 98 | 0.62 | 0.99 [0.81–1.2] |
T2D | 754 | 192 | 17 | 88 | 12 | ||||||
LXRB | |||||||||||
rs35463555 | promoter | G>A | ND | 417 | 388 | 106 | 67 | 33 | 96 | 0.74 | 0.94 [0.82–1.08] |
(-2046) | T2D | 433 | 432 | 84 | 68 | 32 | |||||
rs17373080 | promoter | C>G | ND | 411 | 386 | 104 | 67 | 33 | 96 | 0.42 | 0.94 [0.82–1.08] |
(-202) | T2D | 430 | 438 | 80 | 68 | 32 | |||||
rs2248949 | intron 6 | C>T | ND | 310 | 432 | 139 | 60 | 40 | 93 | 0.05 | 1.02 [0.90–1.17] |
T2D | 303 | 476 | 136 | 59 | 41 |