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Table 1 Association of APOA2 SNPs with type 2 diabetes.

From: Evaluating the association of common APOA2variants with type 2 diabetes

SNP Allelea Chr Position (NCBI36) Gene Region N subjects   Allele 1 (%) Allele 2 (%) Call Rate OR (95% CI) P DIAGRAM GWAS-MA
P #
rs6413453 C/T 159458940 INTRONIC T2D 1414 2523 (89) 299 (11) >99% 1.04 (0.89–1.23) 0.619 0.808$
     NG 1581 2809 (89) 347 (11) >99%    
rs5085 G/C 159459135 INTRONIC T2D 1441 2304 (80) 568 (20) 100% 1.08 (0.95–1.23) 0.245 0.225
     NG 1596 2595 (81) 593 (19) >99%    
rs5082 T/C 159460307 UPSTREAM T2D 1442 1796 (63) 1066 (37) >99% 1.03 (0.93–1.14) 0.591 0.408$
     NG 1603 1963 (62) 1199 (38) >99%    
  1. aSNP alleles are shown as major/minor. #Please refer to Methods section for details. $Imputed SNPs.