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Table 1 Primers used for detecting SNPs in BDNF and SLC1A3 gene with optimized temperatures and product size

From: SLC1A3 C3590T but not BDNF G196A is a predisposition factor for stress as well as depression, in an adolescent eastern Indian population

Gene

Primers

Annealing Temp

Product size

Forward

Reverse

BDNF

5’AAAGAAGCAAACATCCGAGGACAA3’

5’ATTCCTCCAGCAGAAAGAGAAGAGG3’

61 °C

274

SLC1A3 C3590T (3’UTR)

5’TGGAGTGGGGTTTGCTTTTG3’

5’GCCAGAAACTCAAACACAGC3’

60 °C

232

SLC1A3 G869C (Coding region)

5’ATTTCTGTGGACTAGCTTGGTG3’

5’TTACCAAGAAGTAGAGGAGTGGC3’

63 °C

223