Marker | MAF | Comparing groups | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Total (n = 1716) | CHB | PC (n = 761) | CHB vs. PC | HCC (−) vs. PC | HCC (+) vs. PC | HCC (−) vs. HCC (+) | ||||||||||
All CHB (n = 955) | HCC (−) (n = 659) | HCC (+) (n = f) | ||||||||||||||
OR (95% CI) | P* | Pcorr** | OR (95% CI) | P* | Pcorr** | OR (95% CI) | P* | Pcorr** | OR (95% CI) | P* | ||||||
rs4151667 | 0.018 | 0.019 | 0.018 | 0.022 | 0.016 | 1.23 (0.73–2.08) | 0.42 | – | 1.16 (0.65–2.06) | 0.61 | – | 1.41 (0.70–2.80) | 0.34 | – | 0.82 (0.41–1.63) | 0.58 |
rs12614 | 0.078 | 0.053 | 0.054 | 0.048 | 0.112 | 0.43 (0.33–0.57) | 5.91 × 10−10 | 2.36 × 10−8 | 0.45 (0.33–0.61) | 6.60 × 10− 8 | 2.64 × 10−6 | 0.39 (0.25–0.60) | 3.10 × 10− 6 | 1.24 × 10−4 | 1.13 (0.72–1.78) | 0.58 |
rs641153 | 0.082 | 0.083 | 0.086 | 0.076 | 0.080 | 1.04 (0.81–1.33) | 0.74 | – | 1.08 (0.83–1.41) | 0.54 | – | 0.94 (0.66–1.34) | 0.75 | – | 1.14 (0.80–1.62) | 0.45 |
rs117314762 | 0.015 | 0.013 | 0.014 | 0.010 | 0.018 | 0.67 (0.38–1.17) | 0.16 | – | 0.73 (0.40–1.34) | 0.31 | – | 0.54 (0.22–1.32) | 0.15 | – | 1.35 (0.53–3.45) | 0.51 |
rs1048709 | 0.279 | 0.269 | 0.265 | 0.277 | 0.293 | 0.88 (0.76–1.02) | 0.11 | – | 0.86 (0.73–1.02) | 0.09 | – | 0.92 (0.74–1.14) | 0.47 | – | 0.94 (0.75–1.16) | 0.58 |
rs537160 | 0.333 | 0.327 | 0.322 | 0.340 | 0.341 | 0.93 (0.81–1.08) | 0.39 | – | 0.91 (0.77–1.07) | 0.26 | – | 0.99 (0.81–1.21) | 0.95 | – | 0.91 (0.74–1.13) | 0.43 |
rs541862 | 0.082 | 0.083 | 0.086 | 0.076 | 0.080 | 1.04 (0.81–1.33) | 0.74 | – | 1.08 (0.83–1.41) | 0.54 | – | 0.94 (0.66–1.34) | 0.75 | – | 1.14 (0.80–1.62) | 0.45 |
rs4151657 | 0.323 | 0.335 | 0.341 | 0.321 | 0.307 | 1.13 (0.98–1.30) | 0.09 | – | 1.16 (0.99–1.36) | 0.06 | – | 1.06 (0.86–1.30) | 0.55 | – | 1.09 (0.88–1.34) | 0.40 |
rs45484591 | 0.001 | 0.001 | 0.002 | 0.000 | 0.001 | 0.79 (0.11–5.66) | 0.82 | – | 1.15 (0.16–8.22) | 0.89 | – | – | – | – | – | – |
rs2072633 | 0.477 | 0.468 | 0.467 | 0.471 | 0.488 | 0.92 (0.80–1.05) | 0.25 | – | 0.91 (0.79–1.06) | 0.26 | – | 0.93 (0.77–1.13) | 0.50 | – | 0.98 (0.80–1.19) | 0.85 |