Table 1 Primers and probes used for the analyses of genetic polymorphisms in PCR and ddPCR
Gene | SNP | Primer Sequence 5′-3′/ ddPCR assay sequence (SNP in brackets) | Product (bp) | Polymorphism |
|---|---|---|---|---|
SLC6A4 | 5-HTTLPR | F-ATGTCCCTACTGCAGCCTCC | s(396)/l(440) | (s)/(l) |
R-AGTCCGCGCGGGATTC | ||||
HTR1A | rs6295 | F-GGCTGGACTGTTAGATGATAACG | C(163) G(17 & 146) | C/G |
R-GGAAGAAGACCGAGTGTGTCAT | ||||
NR3C1 | rs41423247 | CATTTGAACGTAAAATTTTGTTTTGCACCATGTTGACACCAATTCCTCTCTTAAAGAGATT | Â | C/G |
[C/G]ATCAGCAGACATAACTTGTCTACTTTATGGCAAGAACCCTGTGAGCAAGACCTGTGTCTAA | ||||
FKBP5 | rs1360780 | F-CTGCAAGTCCCCAAAATTTGAC | Â | C/T |
R-ATCTCTTGTGCCAGCAGTAG | ||||
OXTR | rs53576 | GTCCCCCACACCTCGGGCACAGCATTCATGGAAAGGAAAGGTGTACGGGACATGCCCGAGG[A/G]TCCTCAGTCCCACAGAAACAGGGAGGGGCTGGGAAGCTCATTCTACAGATGGGGAAACAGT | Â | A/G |