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Table 3 Association analysis of rs12997 variant in ACVR1 with primary angle-closure glaucoma

From: Association analysis of polymorphisms rs12997 in ACVR1 and rs1043784 in BMP6 genes involved in bone morphogenic protein signaling pathway in primary angle-closure and pseudoexfoliation glaucoma patients of Saudi origin

Group

Genetic Model

Genotype

Control

n (%)

PACG

n (%)

OR (95% CI)

p

AIC

BIC

p§

Overall

Co-dominant

A/A

110 (44.4)

42 (41.6)

1.00

0.009

416.5

428.1

0.02

A/G

111 (44.8)

35 (34.6)

0.83 (0.49–1.39)

G/G

27 (10.9)

24 (23.8)

2.33 (1.21–4.48)

Dominant

A/A

110 (44.4)

42 (41.6)

1.00

0.64

423.7

431.4

0.900

A/G-G/G

138 (55.6)

59 (58.4)

1.12 (0.70–1.79)

Recessive

A/A-A/G

221 (89.1)

77 (76.2)

1.00

0.003*

415.1

422.8

0.009

G/G

27 (10.9)

24 (23.8)

2.55 (1.39–4.69)

Over-dominant

A/A-G/G

137 (55.2)

66 (65.3)

1.00

0.081

420.9

428.6

0.062

A/G

111 (44.8)

35 (34.6)

0.65 (0.40–1.06)

Log-additive

1.36 (0.99–1.89)

0.062

420.4

428.1

0.150

Men

Co-dominant

A/A

55 (41.0)

22 (50.0)

1.00

0.120

200.8

210.4

0.170

A/G

62 (46.3)

13 (29.6)

0.52 (0.24–1.14)

G/G

17 (12.7)

9 (20.4)

1.32 (0.51–3.41)

Dominant

A/A

55 (41.0)

22 (50.0)

1.00

0.300

202.0

208.4

0.170

A/G-G/G

79 (59.0)

22 (50.0)

0.70 (0.35–1.38)

Recessive

A/A-A/G

117 (87.3)

35 (79.5)

1.00

0.220

201.6

207.9

0.540

G/G

17 (12.7)

9 (20.4)

1.77 (0.73–4.32)

Over-dominant

A/A-G/G

72 (53.7)

31 (70.5)

1.00

0.048

199.2

205.5

0.060

A/G

62 (46.3)

13 (29.6)

0.49 (0.23–1.01)

Log-additive

0.98 (0.60–1.58)

0.920

203.1

209.4

0.530

Women

Co-dominant

A/A

55 (48.2)

20 (35.1)

1.00

0.010

214.5

224

0.006

A/G

49 (43.0)

22 (38.6)

1.23 (0.60–2.53)

G/G

10 (8.8)

15 (26.3)

4.12 (1.60–10.66)

Dominant

A/A

55 (48.2)

20 (35.1)

1.00

0.100

219

225.3

0.140

A/G-G/G

59 (51.8)

37 (64.9)

1.72 (0.89–3.32)

Recessive

A/A-A/G

104 (91.2)

42 (73.7)

1.00

0.003*

212.9

219.1

0.002

G/G

10 (8.8)

15 (26.3)

3.71 (1.55–8.93)

Over-dominant

A/A-G/G

65 (57.0)

35 (61.4)

1.00

0.58

221.4

227.7

0.420

A/G

49 (43.0)

22 (38.6)

0.83 (0.44–1.60)

Log-additive

1.85 (1.17–2.92)

0.0076

214.6

220.8

0.008

  1. §p-value adjusted for age and sex in overall group and by age in men and women groups; *Best-fit model p-value. Abbreviations: AIC Akaike’s information criterion, BIC Bayesian information criterion, OR (95% CI) Odds ratio (95% confidence interval), PACG primary angle-closure glaucoma. Note: Significant odds ratio and p-value in bold. Bonferroni corrected p-value is 0.01