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Table 1 Correlation validation of genes with a significant correlation between CNV and differential gene expression in literature

From: Copy number variation is highly correlated with differential gene expression: a pan-cancer study

Official symbol ρ
Cell lines
r
Cell lines
ρ
TCGA
r TCGA Reference
PRAME 0.12 0.83 0.10 0.96 [9]
NPM1 0.29 0.90 0.45 0.98 [10]
SOX2 0.19 0.82 0.20 0.65 [12]
NFASC 0.08 0.32 0.05 0.24 [13]
MYCN 0.14 0.68 0.12 0.76 [14]
EHF 0.14 0.83 0.13 0.92 [15]
FAM60A 0.51 0.99 0.36 0.91 [16]
CD274 0.12 0.83 0.26 0.82 [17]
FGFR1 0. 16 0.90 0.20 0.90 [18]
STK11 0.39 1.00 0.42 0.96 [19]