BMC Medical Genetics

Table 1 Correlation validation of genes with a significant correlation between CNV and differential gene expression in literature

From: Copy number variation is highly correlated with differential gene expression: a pan-cancer study

Official symbol	ρ Cell lines	r Cell lines	ρ TCGA	r TCGA	Reference
PRAME	0.12	0.83	0.10	0.96	[9]
NPM1	0.29	0.90	0.45	0.98	[10]
SOX2	0.19	0.82	0.20	0.65	[12]
NFASC	0.08	0.32	0.05	0.24	[13]
MYCN	0.14	0.68	0.12	0.76	[14]
EHF	0.14	0.83	0.13	0.92	[15]
FAM60A	0.51	0.99	0.36	0.91	[16]
CD274	0.12	0.83	0.26	0.82	[17]
FGFR1	0. 16	0.90	0.20	0.90	[18]
STK11	0.39	1.00	0.42	0.96	[19]

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ISSN: 1471-2350

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