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Table 3 Annotated DMR’s Associated with Gestational Age

From: Effect of prematurity on genome wide methylation in the placenta

DMR Location DMR Width baseMean log2FoldChange padj Annotation Nearest Gene
chr11:1069274–1,070,940 1666 275.32 −0.077895692 0.000669 Distal Intergenic MUC2
chr7:158509261–158,511,170 1909 785.4202 −0.055129353 0.001379 Distal Intergenic NCAPG2
chr8:143302532–143,305,491 2959 708.6988 −0.057666861 0.001379 Intron LINC00051
chr11:51578780–51,581,392 2612 5862.829 0.12089555 0.007632 Distal Intergenic OR4C46
chr15:22741828–22,744,210 2382 1025.047 −0.091557436 0.007632 Exon GOLGA6L1
chr17:21901995–21,907,966 5971 1435.135 0.114589697 0.008451 Promoter (<=1 kb) FLJ36000
chr11:51587551–51,593,541 5990 6613.759 0.114797282 0.012877 Distal Intergenic OR4C46
chr10:115540476–115,542,108 1632 369.5293 −0.058238042 0.015459 Promoter (2-3 kb) MIR4483
chr4:9875–10,674 799 300.733 −0.066430834 0.020835 Distal Intergenic ZNF595
chr5:49415136–49,417,649 2513 629.6273 0.098693759 0.020835 Distal Intergenic EMB
chr15:56071747–56,073,363 1616 280.2815 −0.044766281 0.028409 Distal Intergenic PRTG
chrY:59027085–59,033,404 6319 757.9891 0.085296918 0.028937 Distal Intergenic SPRY3
chr10:127579482–127,584,720 5238 732.2817 0.072848407 0.032657 Promoter (<=1 kb) DHX32
chr10:134878560–134,880,844 2284 289.1369 −0.080610086 0.032657 Distal Intergenic ADGRA1
chr11:1795935–1,798,177 2242 452.7534 −0.059025405 0.032657 Distal Intergenic MOB2
chr11:51570928–51,573,041 2113 623.7097 0.10472301 0.032657 Distal Intergenic OR4C46
chr11:51581774–51,585,209 3435 3634.642 0.099090126 0.032657 Distal Intergenic OR4C46
chr19:24622360–24,624,613 2253 338.0393 0.100239042 0.032657 Distal Intergenic HAVCR1P1
chr2:60693762–60,695,701 1939 293.8868 −0.074300347 0.032657 Intron BCL11A
chr2:90374619–90,378,951 4332 2470.989 0.08904097 0.032657 Intron MIR4436A
chr2:92280419–92,282,186 1767 1109.498 0.085845619 0.032657 Distal Intergenic ACTR3BP2
chr21:11121793–11,128,301 6508 1510.744 0.043743747 0.032657 Distal Intergenic BAGE
chr5:49413369–49,415,026 1657 555.3467 0.102896519 0.032657 Distal Intergenic EMB
chr6:58775746–58,780,286 4540 59,219.18 0.088992793 0.032657 Distal Intergenic GUSBP4
chr6:132921367–132,922,856 1489 702.8588 −0.077101273 0.032657 Distal Intergenic TAAR3
chr7:155125413–155,128,850 3437 1162.764 −0.038748136 0.032657 Distal Intergenic INSIG1
chr7:155199140–155,201,882 2742 355.5753 −0.077494132 0.032657 Distal Intergenic EN2
chr2:91603906–91,606,341 2435 1002.445 0.094259612 0.033077 Distal Intergenic LOC654342
chr1:16888159–16,896,002 7843 1691.305 0.055571393 0.035079 3′ UTR MIR3675
chr2:91595932–91,600,986 5054 2660.109 0.085847679 0.035079 Distal Intergenic LOC654342
chr5:49428377–49,432,607 4230 1837.6 0.094529868 0.035079 Distal Intergenic EMB
chr5:49434812–49,441,568 6756 3582.595 0.092033374 0.035079 Distal Intergenic EMB
chr8:143093456–143,095,020 1564 434.2594 −0.048625159 0.037056 Distal Intergenic MIR4472–1
chr9:43157894–43,160,792 2898 440.6311 −0.051599615 0.038038 Distal Intergenic LOC642929
chr3:196625149–196,626,329 1180 5459.852 0.091127805 0.03925 Intron SENP5
chr1:2775172–2,776,643 1471 300.3145 −0.049869539 0.043507 Distal Intergenic TTC34
chr1:161411315–161,417,356 6041 980.0181 0.059054185 0.043507 Exon FCGR2A
chr1:227165108–227,167,121 2013 321.0379 −0.05472419 0.043507 Promoter (<=1 kb) ADCK3
chr10:42639382–42,642,799 3417 471.9378 0.053591881 0.043507 Distal Intergenic LOC441666
chr12:117759233–117,761,187 1954 733.3737 −0.051097394 0.043507 Intron NOS1
chr12:131743021–131,745,096 2075 402.1728 −0.04241032 0.043507 Distal Intergenic LINC01257
chr14:104680716–104,682,479 1763 393.9317 −0.039036454 0.043507 Distal Intergenic KIF26A
chr14:106130890–106,133,431 2541 327.5869 −0.050328469 0.043507 Intron ELK2AP
chr18:9876–11,028 1152 869.3626 −0.058790034 0.043507 Distal Intergenic ROCK1P1
chr2:90380982–90,382,232 1250 703.058 0.087608099 0.043507 Intron MIR4436A
chr2:90390888–90,393,740 2852 1224.857 0.082639282 0.043507 Intron MIR4436A
chr2:232245135–232,247,014 1879 684.5341 −0.049273959 0.043507 Distal Intergenic B3GNT7
chr2:233878888–233,880,783 1895 458.8731 −0.042533652 0.043507 Promoter (<=1 kb) NGEF
chr21:47233703–47,236,436 2733 660.0114 −0.045879449 0.043507 Intron LOC100129027
chr22:28043663–28,045,838 2175 319.4394 −0.045382128 0.043507 Distal Intergenic MN1
chr3:185842547–185,844,972 2425 338.0063 −0.040820001 0.043507 Distal Intergenic ETV5
chr4:3679282–3,681,125 1843 632.2126 −0.039394589 0.043507 Promoter (<=1 kb) LOC100133461
chr5:171997237–171,998,674 1437 574.0105 −0.040752286 0.043507 Distal Intergenic NEURL1B
chr5:172145042–172,146,642 1600 283.15 −0.039405643 0.043507 Distal Intergenic DUSP1
chr7:35083300–35,086,409 3109 667.0347 −0.063938851 0.043507 Exon DPY19L1
chr8:27426562–27,428,394 1832 618.5586 −0.046453345 0.043507 Distal Intergenic CLU
chrX:148615982–148,617,887 1905 496.8346 −0.071187463 0.043507 Promoter (<=1 kb) IDS
chr14:77322208–77,324,017 1809 358.4726 −0.036853715 0.043857 Exon LRRC74A
chr14:94213175–94,214,970 1795 274.9046 −0.044559973 0.043963 Intron PRIMA1
chr8:143824284–143,827,190 2906 872.6112 −0.056328342 0.043963 Promoter (<=1 kb) SLURP1
chr2:92289472–92,292,822 3350 4738.836 0.085456146 0.04533 Distal Intergenic ACTR3BP2
chr1:15170988–15,172,589 1601 341.8562 −0.043070132 0.045985 Intron KAZN
chr1:22873178–22,875,162 1984 628.9255 −0.048195935 0.045985 Distal Intergenic EPHA8
chr15:32781660–32,783,301 1641 391.2485 −0.044570446 0.045985 Distal Intergenic GOLGA8O
chr2:92294963–92,300,499 5536 4633.964 0.085605878 0.048908 Distal Intergenic ACTR3BP2
chr4:5852906–5,854,271 1365 315.8726 −0.042689188 0.048908 Exon CRMP1
chr7:15223273–15,225,157 1884 555.7869 −0.050035386 0.048908 Distal Intergenic DGKB