From: Polymorphisms in IL36G gene are associated with plaque psoriasis
SNP | Reference allele | Control RAF | Plaque psoriasis | Early onset | Late onset | Familial | Sporadic | Spring-summer | Fall-winter | PsA+ | Male | Female | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RAF | P value | RAF | P value | RAF | P value | RAF | P value | RAF | P value | RAF | P value | RAF | P value | RAF | P value | RAF | P value | RAF | P value | |||
rs28947205 | T | 0.021 | 0.042 | 0.0197 | 0.039 | 0.0502 | 0.053 | 0.0086 | 0.036 | 0.112 | 0.047 | 0.0095 | 0.038 | 0.3414 | 0.040 | 0.037 | 0.035 | 0.2001 | 0.050 | 0.0417 | 0.033 | 0.5279 |
rs12328178 | G | 0.013 | 0.036 | 0.0064 | 0.035 | 0.0094 | 0.038 | 0.0124 | 0.034 | 0.0155 | 0.037 | 0.0071 | 0.038 | 0.094 | 0.035 | 0.0081 | 0.040 | 0.0098 | 0.042 | 0.0611 | 0.028 | 0.1299 |
rs28947206 | T | 0.002 | 0.023 | 6.0E-4 | 0.021 | 0.0014 | 0.030 | 1.0E-4 | 0.026 | 4.0E-4 | 0.021 | 0.0013 | 0.024 | 0.0036 | 0.020 | 0.0021 | 0.018 | 0.0069 | 0.026 | 0.0095 | 0.020 | 0.0548 |
rs28947207 | T | 0.011 | 0.045 | 2.0E-4 | 0.043 | 4.0E-4 | 0.053 | 1.0E-4 | 0.039 | 0.0019 | 0.050 | 7.09E-5 | 0.037 | 0.0594 | 0.042 | 5.0E-4 | 0.035 | 0.0137 | 0.049 | 0.0015 | 0.040 | 0.0945 |
rs17042686 | C | 0.066 | 0.076 | 0.4358 | 0.073 | 0.5793 | 0.085 | 0.2965 | 0.066 | 0.9968 | 0.083 | 0.2391 | 0.075 | 0.752 | 0.079 | 0.3278 | 0.101 | 0.0754 | 0.081 | 0.3216 | 0.069 | 0.9764 |
rs6707930 | A | 0.012 | 0.005 | 0.1014 | 0.003 | 0.0424 | 0.010 | 0.8038 | 0.007 | 0.4366 | 0.003 | 0.0577 | 0.000 | 0.3314 | 0.004 | 0.1099 | 0.007 | 0.5659 | 0.007 | 0.6401 | 0.002 | 0.013 |
rs13410389 | A | 0.085 | 0.071 | 0.3241 | 0.074 | 0.4436 | 0.064 | 0.3023 | 0.057 | 0.0852 | 0.084 | 0.9262 | 0.121 | 0.3308 | 0.071 | 0.3225 | 0.075 | 0.6474 | 0.063 | 0.0582 | 0.081 | 0.7473 |
rs34216066 | C | 0.095 | 0.064 | 0.0172 | 0.060 | 0.0104 | 0.075 | 0.3267 | 0.055 | 0.0114 | 0.071 | 0.1139 | 0.013 | 0.0148 | 0.062 | 0.0204 | 0.047 | 0.0171 | 0.080 | 0.238 | 0.044 | 4.0E-4 |
rs28947211 | C | 0.041 | 0.010 | 1.75E-5 | 0.008 | 1.58E-5 | 0.017 | 0.058 | 0.007 | 3.0E-4 | 0.013 | 0.0018 | 0.000 | 0.0627 | 0.010 | 6.83E-5 | 0.008 | 0.0095 | 0.012 | 0.0635 | 0.009 | 4.0E-4 |
rs13392494 | T | 0.464 | 0.515 | 0.0822 | 0.522 | 0.0568 | 0.492 | 0.4916 | 0.526 | 0.0668 | 0.507 | 0.1855 | 0.407 | 0.4282 | 0.511 | 0.1284 | 0.442 | 0.5997 | 0.540 | 0.1847 | 0.482 | 0.9231 |
rs7584409 | G | 0.310 | 0.328 | 0.4439 | 0.330 | 0.4223 | 0.323 | 0.7017 | 0.329 | 0.502 | 0.329 | 0.4687 | 0.300 | 0.8522 | 0.326 | 0.5148 | 0.324 | 0.6925 | 0.331 | 0.8454 | 0.326 | 0.6515 |