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Table 2 The haplotype association testing of two SNPs in DSCAM in South Chinese population using 1473 cases and 943 controls

From: Association between DSCAM polymorphisms and non-syndromic Hirschsprung disease in Chinese population

NSNP

Chr

BP1

BP2

SNP1

SNP2

HAPLOTYPE

F_A

F_U

OR

P

2

21

40,662,426

40,676,385

rs2837770

rs8134673

AA

0.42

0.46

0.85

7.45E-03

2

21

40,662,426

40,676,385

rs2837770

rs8134673

GG

0.58

0.54

1.14

0.027

  1. NSNP Number of Single Nucleotide Polymorphism, Chr Chromosome, BP Base pair of where the SNP is located; HAPLOTYPE the haplotype composed by two SNPs F_A/F_U indicates risk allele frequency of the haplotype in cases or controls. The calculation of odds ratio (OR) was based on the haplotype of patients. The P value indicates the significance based on different association tests