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Table 2 The haplotype association testing of two SNPs in DSCAM in South Chinese population using 1473 cases and 943 controls

From: Association between DSCAM polymorphisms and non-syndromic Hirschsprung disease in Chinese population

NSNP Chr BP1 BP2 SNP1 SNP2 HAPLOTYPE F_A F_U OR P
2 21 40,662,426 40,676,385 rs2837770 rs8134673 AA 0.42 0.46 0.85 7.45E-03
2 21 40,662,426 40,676,385 rs2837770 rs8134673 GG 0.58 0.54 1.14 0.027
  1. NSNP Number of Single Nucleotide Polymorphism, Chr Chromosome, BP Base pair of where the SNP is located; HAPLOTYPE the haplotype composed by two SNPs F_A/F_U indicates risk allele frequency of the haplotype in cases or controls. The calculation of odds ratio (OR) was based on the haplotype of patients. The P value indicates the significance based on different association tests