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Table 4 Most encountered HLA (class I-class II) two loci haplotypes

From: HLA class I (-A, -B, -C) and class II (-DR, -DQ) polymorphism in the Mauritanian population

Haplotypes HF (%) LDx100 RLD Haplotypes HF (%) LDx100 RLD
A-B A-C
 A*02B*07 4.44 1.26 0.12  A*02C*02 10.00 3.18 0.27
 A*01B*07 3.33 2.03 0.17  A*23C*02 8.88 2.09 0.23
 A*02B*15 3.33 1.22 0.17  A*01C*02 4.44 1.21 0.13
 A*23B*07 3.33 0.94 0.08  A*01C*06 4.44 1.66 0.15
 A*23B*08 3.33 1.78 0.27  A*02C*06 4.44 1.08 0.1
 A*30B*50 3.33 1.14 0.23  A*23C*07 3.33 1.55 0.14
 A*01B*37 2.22 1.41 0.42  A*30C*02 3.33 −1.11 −0.24
 A*02B*35 2.22 0.26 0.04  A*30C*07 3.33 0.85 0.08
 A*02B*39 2.22 1.55 1  A*02C*07 2.22 −1.08 −0.29
 A*02B*42 2.22 1.18 0.38  A*03C*07 2.22 1.04 0.37
 A*23B*15 2.22 0.68 0.09  A*29C*02 2.22 −2.55 −0.59
 A*23B*27 2.22 0.81 0.12  A*29C*07 2.22 0.15 0.02
 A*30B*15 2.22 0.75 0.1     
 A*30B*27 2.22 0.88 0.13 DRB1-DQB1
      DRB1*13DQB1*06 11.94 7.04 0.61
B-C  DRB1*03DQB1*02 11.19 5.7 0.35
 B*07C*02 8.88 3.86 0.44  DRB1*03DQB1*03 10.45 1.36 0.08
 B*15C*02 8.88 4.61 0.83  DRB1*13DQB1*03 8.21 −2.49 −0.23
 B*27C*02 5.55 3.03 0.61  DRB1*13DQB1*05 6.72 1.15 0.09
 B*35C*02 4.44 0.76 0.14  DRB1*11DQB1*03 5.22 0.9 0.01
 B*44C*07 4.44 2.49 0.46  DRB1*07DQB1*02 4.48 3.02 0.57
 B*08C*02 3.33 0.15 0.03  DRB1*10DQB1*05 4.48 3.36 0.69
 B*37C*06 3.33 2.33 0.71  DRB1*11DQB1*02 3.73 0.18 0.01
 B*40C*07 3.33 2.3 1  DRB1*11DQB1*04 2.99 1.76 0.28
 B*07C*06 2.22 −0.09 −0.01  DRB1*11DQB1*05 2.99 −0.08 −0.03
 B*07C*07 2.22 0.75 0.16  DRB1*08DQB1*03 2.24 1.17 0.61
 B*08C*03 2.22 0.15 0.23  DRB1*13DQB1*04 2.24 0.01 0.01
 B*08C*07 2.22 1.33 0.22  DRB1*01DQB1*03 1.49 0.69 0.48
 B*35C*01 2.22 2.37 0.56  DRB1*03DQB1*05 1.49 −3.25 −0.68
      DRB1*03DQB1*06 1.49 −3.67 −0.64
A-DRB1  DRB1*04DQB1*03 1.49 0.42 0.22
 A*02DRB1*03 11.9 4.3 0.32     
 A*01DRB1*07 5.95 3.35 0.48 A-DQB1
 A*23DRB1*03 5.95 1.62 0.15  A*30DQB1*03 8.33 2.68 0.33
 A*74DRB1*13 5.95 2.81 0.75  A*02DQB1*02 7.14 3.85 0.26
 A*23DRB1*13 4.76 −0.99 −0.21  A*02DQB1*03 7.14 −0.44 −0.06
 A*30DRB1*13 4.76 1.41 0.16  A*01DQB1*02 5.95 3.06 0.27
 A*02DRB1*13 3.57 −2.15 −0.37  A*23DQB1*02 5.95 1.27 0.11
 A*29DRB1*03 3.57 1.19 0.12  A*23DQB1*03 4.76 1.15 0.12
 A*30DRB1*11 3.57 −0.03 −0.01  A*01DQB1*03 3.57 −0.64 −0.13
 A*01DRB1*03 2.38 −1.11 −0.28  A*01DQB1*05 3.57 0.25 0.02
 A*01DRB1*11 2.38 −0.29 −0.14  A*02DQB1*05 3.57 −0.5 −0.15
 A*03DRB1*13 2.38 0.66 0.26  A*29DQB1*06 3.57 1.34 0.13
 A*23DRB1*15 2.38 2.19 0.71  A*74DQB1*03 3.57 0.76 0.22
 A*29DRB1*11 2.38 0.87 0.08  A*23DQB1*05 2.38 −0.63 −0.26
 A*30DRB1*03 2.38 −1.53 −0.45  A*23DQB1*06 2.38 −0.76 −0.3
 A*30DRB1*10 2.38 1.24 0.31  A*29DQB1*04 2.38 1.78 0.28
 A*34DRB1*13 2.38 0.33 0.26  A*30DQB1*04 2.38 0.89 0.14
 A*66DRB1*13 2.38 1.24 1  A*30DQB1*05 2.38 −0.33 −0.15
     C-DRB1
B-DRB1  C*02DRB1*03 16.67 4.29 0.25
 B*07DRB1*03 5.95 1.51 0.18  C*07DRB1*13 9.52 1.81 0.13
 B*15DRB1*03 5.95 2.86 0.49  C*02DRB1*11 4.76 −0.61 −0.12
 B*50DRB1*13 4.76 2.08 0.5  C*02DRB1*13 4.76 −4.92 −0.43
 B*08DRB1*03 3.57 1.84 0.31  C*03DRB1*13 4.76 1.61 0.37
 B*27DRB1*13 3.57 1.44 0.26  C*02DRB1*08 3.57 1.76 1
 B*37DRB1*07 3.57 2.64 0.72  C*06DRB1*03 3.57 −0.63 −0.19
 B*40DRB1*13 3.57 2.04 1  C*06DRB1*07 3.57 1.69 0.24
 B*44DRB1*13 3.57 2.08 0.5  C*06DRB1*13 3.57 0.5 0.06
 B*50DRB1*13 3.57 2.08 0.51  C*07DRB1*11 3.57 −0.61 −0.12
 B*07DRB1*08 2.38 1.61 0.61  C*08DRB1*13 3.57 2.48 1
 B*08DRB1*11 2.38 0.88 0.12  C*02DRB1*10 2.38 0.2 0.07
 B*08DRB1*13 2.38 −0.56 −0.21  C*05DRB1*07 2.38 1.59 0.63
 B*18DRB1*03 2.38 0.92 0.31  C*06DRB1*11 2.38 −0.94 −0.5
 B*35DRB1*03 2.38 −0.09 −0.03  C*07DRB1*03 2.38 −2.54 −0.48
  1. HF haplotype frequency, LD linkage disequilibrium, RLD relative linkage disequilibrium