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Table 2 SNPs evaluated according to Hardy-Weinberg equilibrium. The allele information were showed as Reference allele/Risk allele. P < 0.05 in bold. SNPs. Single nucleotide polymorphism; MAF: Minor Alleles frequency; HWE: Hardy-Weinberg Equilibrium. MAF YRI Minor Alleles frequency of population African; MAF EUR Minor Alleles frequency of European according with 1000 genomes project

From: A new panel of SNPs to assess thyroid carcinoma risk: a pilot study in a Brazilian admixture population

SNPs Allele MAF HWE Missing
Genotypes (%)
MAF YRI MAF EUR
rs11749656 C/A 2.4 1.0000 3.1 5.0
rs1254167 G/C 8.7 1.0000 2.3 11.1 10.1
rs17026194 G/A 1.9 1.0002 1.2 5.5
rs17821714 G/A 3.7 1.0003 0.8 6.5
rs4245211 A/G 34.9 0.8885 5.8 40.7 26.7
rs6507639 T/G 7.1 1.0000 2.3 11.1 7,5
rs2910164 G/C 34.5 0.8899 1.9
rs6578493 A/C 19.9 0.8439 4.2 22.6 22.7
rs6825379 A/G 14.5 0.6189 3.1 30.5 5.0
rs664677 T/C 35.7 1.0000 4.2 19.4 44.4
rs10790373 C/T 27.8 0.7458 10 30.0 20.7
rs2651339 A/C 48.2 0.5273 4.6 44.4 48.4
rs566309 C/T 8.6 0.7043 1.5 11.1 9.6
rs2356508 C/A 8.7 1.0000 2.3 10.6 7.5
rs3744962 T/C 7.3 0.6285 2.3 0.9 8.5
rs17485896 T/C 22.7 0.4762 2.7 8.3 34.8
rs11856964 A/C 12.2 0.5525 1.9 14.3 13.1
rs1158257 C/T 46.9 0.7065 1.5 39.8 48.9
rs9943744 C/T 46.7 0.5285 2.3 28.2 42.9
rs7028661 G/A 31.0 0.3770 3.8 15.7 35.3
rs258107 C/T 27.9 0.4344 3.5 17.1 30.3
rs9993140 G/A 3.9 0.3222 2.3 15.2 1.5
rs31872 T/C 22.7 0.1938 8.5 8.8 33.8
rs11720059 G/A 6.0 0.2120 3.5 9.0
rs949908 T/A 47.6 0.1593 5.8 45.3 45.4
rs965513 G/A 29.1 0.2244 1.5 13.4 35.5
rs4075022 T/C 28.2 0.0827 5.8 6.0 43.4
rs12137541 G/A 22.4 0.0701 2.3 16.6 27.7
rs1801516 G/A 12.3 0.0869 1.2 18.1
rs1499008 G/A 37.2 0.1066 2.7 22.2 47.4
rs1461855 T/A 20.2 0.0799 1.9 45.8 8.0
rs2839582 T/C 40.7 0.0671 3.1 47.6 29.2
rs4075570 G/A 49.2 0.1263 5.0 39.3 38.8
rs7037324 G/A 26.5 0.0504 3.5 7.4 39.3
rs6983267 G/T 31.0 0.0236 6.9 2.7 48.4
rs4698951 T/C 26.8 0.0103 1.2 37.9 6.0
rs17072086 T/C 15.9 0.0038 1.9 0.4 22.7
rs2284734 G/A 46.3 0.0027 1.2 20.8 33.8
rs2997312 G/A 28.1 0.0079 2.3 43.9 12.6
rs10912963 G/C 40.9 0.0059 4.6 17.5 44.9
rs12206214 G/A 28.8 0.0056 3.1 17.5 42.9
rs13447450 C/T 17.4 0.0007 1.5 0.9 37.8
rs162270 G/T 15.1 0.0002 2.7
rs9937860 T/G 15.1 0.0002 3.5 16.6 12.1
rs944289 C/T 38.1 0.00004 1.2 12.9 39.3
  1. The allele information were showed as Reference allele/Risk allele. P < 0.05 in bold. SNPs. Single nucleotide polymorphism; MAF Minor Alleles frequency, HWE Hardy-Weinberg Equilibrium. MAF YRI Minor Alleles frequency of population African; MAF EUR Minor Alleles frequency of European according with 1000 genomes project