Analysis of SNP-SNP interactions and bone quantitative ultrasound parameter in early adulthood

BMC Medical Genetics

Table 1 General information for the studied single nucleotide polymorphisms (SNPs)

Chromosome	Gene	SNP	Allele	MAF in this study	HWE (p)
2	SPTBN1	rs11898505	G > A	0.37	0.75
6	RSPO3	rs7741021	A > C	0.39	0.84
6	CCDC170	rs4869739	A > T	0.35	0.22
6	ESR1	rs3020331	C > T	0.43	0.10
6	ESR1	rs2982552	C > T	0.49	0.19
6	ESR1	rs2234693	T > C	0.44	0.19
6	ESR1	rs9340799	A > G	0.34	0.75
7	WNT16	rs2908007	T > C	0.18	0.33
7	WNT16	rs2908004	T > C	0.22	0.25
7	WNT16	rs3801387	T > C	0.10	0.78
7	WNT16	rs3801385	A > G	0.09	0.33
7	WNT16	rs2707466	G > A	0.22	0.39
7	WNT16	rs2536184	G > A	0.03	0.09
8	OPG	rs4355801	A > G	0.39	0.17
8	OPG	rs3102735	T > C	0.12	0.35
8	OPG	rs2073618	G > C	0.46	0.63
10	DKK1	rs7902708	G > C	0.11	0.77
11	TMEM135	rs597319	A > G	0.31	0.19
11	LRP5	rs2306862	C > T	0.19	0.32
11	LRP5	rs556442	A > G	0.42	0.88
11	LRP5	rs3736228	C > T	0.17	0.46
13	RANKL	rs9594759	T > C	0.48	0.40
13	RANKL	rs12585014	G > A	0.18	0.11
13	RANKL	rs7988338	G > A	0.19	0.40
13	RANKL	rs2148073	C > G	0.18	0.60
17	SOST	rs4792909	G > T	0.42	0.31
17	SOST	rs851054	A > G	0.38	0.06
17	SOST	rs2023794	T > C	0.05	0.18
18	RANK	rs1805034	C > T	0.41	0.26
18	RANK	rs12458117	G > A	0.19	0.35
18	RANK	rs3018362	A > G	0.32	0.18
19	GPATCH1	rs10416265	A > G	0.32	0.06

ISSN: 1471-2350