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Table 5 Tajima’s D at PPARGC1A calculated with window sizes of 1 kbp, 5 kbp, and 30 kbp

From: Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A

 

Tajima’s D

2.5% Quantile

Chromosome Mean

97.5% Quantile

Tajima’s D value for 1 kb window containing rs8192678

 CEU

0.810

−1.127

0.772

3.053

 CHB

2.400

−0.835

1.068

3.199

 CHS

2.566

−0.835

1.104

3.218

 GBR

0.924

−1.091

0.817

3.068

 YRI

−0.445

−1.193

0.233

2.606

 Māori

−0.080

−1.083

0.886

2.996

 Samoan

0.622

−1.119

0.943

3.103

Tajima’s D value for 5 kb window containing rs8192678

 CEU

1.010

−1.358

1.089

3.805

 CHB

1.729

−1.068

1.538

4.168

 CHS

1.923

−1.054

1.599

4.204

 GBR

1.846

−1.299

1.153

3.865

 YRI

−0.150

−1.486

0.310

2.892

 Māori

−1.040

−1.295

1.275

3.905

 Samoan

−0.235

−1.383

1.363

4.074

Tajima’s D value for 30 kb window containing rs8192678

 CEU

1.480

−1.711

1.489

4.052

 CHB

2.585

−1.265

2.102

4.730

 CHS

2.267

−1.175

2.201

4.788

 GBR

1.963

−1.571

1.567

4.185

 YRI

0.029

−1.693

0.432

2.693

 Māori

−1.098

−1.463

1.732

4.416

 Samoan

−0.299

−1.698

1.857

4.616

  1. Mean, 2.5% quantile and 97.5% quantile were calculated for chromosome 4 by population