From: Variants in CXCR4 associate with juvenile idiopathic arthritis susceptibility
Chr | Pos | Ref | Obs | Exonic Function | ESP6500 | 1000G | dbSNP135 | CASE Freq. | CTRL Freq. |
---|---|---|---|---|---|---|---|---|---|
chr2 | 136872553 | G | A | synonymous SNV | 0.000461 | 0.0014 | rs144110709 | 0 | 1 |
chr2 | 136872565 | G | C | synonymous SNV | Â | Â | Â | 0 | 1 |
chr2 | 136872705 | T | C | nonsynonymous SNV | Â | Â | Â | 0 | 1 |
chr2 | 136872715 | G | A | synonymous SNV | 0.003306 | 0.0018 | rs148279552 | 3 | 7 |
chr2 | 136872727 | A | G | synonymous SNV | 0.000077 | Â | rs146627075 | 1 | 0 |
chr2 | 136872970 | G | T | nonsynonymous SNV | Â | Â | Â | 1 | 0 |
chr2 | 136873084 | G | A | synonymous SNV | 0.036983 | 0.06 | rs2228014 | 40 | 41 |
chr2 | 136873341 | T | G | nonsynonymous SNV | 0.000308 | Â | rs56400844 | 2 | 0 |
chr2 | 136873491 | G | C | nonsynonymous SNV | Â | Â | Â | 1 | 0 |
chr2 | 136873496 | A | T | stopgain SNV | Â | Â | Â | 1 | 0 |