Genetic association analysis of miRNA SNPs implicates MIR145 in breast cancer susceptibility

BMC Medical Genetics

Table 2 List of the miRNA SNPs included in multiplex primer design using the MassARRAY® Assay Design Suite v1.0 software (SEQUENOM Inc., San Diego, CA, USA)

miRNA	Locus	Location	SNPs in gene region	MAF	Location	SNPs near 3' end	MAF	Location	SNPs near 5' end	MAF	Location
MIR210	11p15.5	568,089 - 568,198				rs1062099	0.1877	567,627	rs7395206	0.5000	568,211
MIR210	11p15.5	568,089 - 568,198				rs1062099	0.1877	567,627	rs10902173	0.4835	570,072
MIR34A	1p36.22	9,211,727 - 9,211,836	rs35301225	NA	9,211,802	rs77585961	0.0247	9,211,468
MIR155	21q21.3	26,946,292 - 26,946,356				rs2829801	0.4707	26,944,305	rs1547354	0.0810	26,946,709
MIR221	Xp11.3	45,605,585 - 45,605,694				rs7050391	0.0133	45,605,273	rs2858061	0.4352	45,606,132
									rs2858060	0.4991	45,607,008
									rs2858059	0.4786	45,607,190
MIR222	Xp11.3	45,606,421 - 45,606,530				rs2858061	0.4352	45,606,132	rs2858060	0.4991	45,607,008
MIR222	Xp11.3	45,606,421 - 45,606,530				rs2858061	0.4352	45,606,132	rs2858059	0.4786	45,607,190
MIR21	17q23.1	57,918,627 - 57,918,698				rs112394324	0.0032	57,918,251	rs1292037	0.2440	57918908
MIR21	17q23.1	57,918,627 - 57,918,698				rs3851812	0.0371	57,918,370	rs13137	0.2440	57919031
MIRLET7A1	9q22.32	96,938,239 - 96,938,318				rs10761322	0.4588	96,937,478
MIRLET7A1	9q22.32	96,938,239 - 96,938,318				rs10739971	0.2601	96,937,680
MIRLET7A2	11q24.1	122,017,230 - 122,017,301				rs629367	0.1451	122,017,014	rs1143770	0.4867	122,017,598
									rs562052	0.3265	122,018,550
									rs693120	0.3265	122,019,011
MIR145	5q32	148,810,209 - 148,810,296				rs55945735	0.2010	148,809,158	rs353291	0.3324	148,810,746
MIR145	5q32	148,810,209 - 148,810,296				rs73798217	0.0545	148,809,918	rs353291	0.3324	148,810,746

ISSN: 1471-2350