Chr | Nucleotide | Ref base | Alt base | Gene symbol | Gene name | Cardiac expression (FKPM) | Amino acid replacement | rs SNP ID | ESP6500 alleles | 1 K Genomes allele frequency | GERP score | Grantham score | PolyPhen score |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 236882307 | G | A | ACTN2 | Actinin, alpha 2 | 581.019 | Ala119Thr | 0 | G = 13006 | 0 | 5.56 | 58 | 0.999 |
12 | 33049590 | C | T | PKP2 | Plakophilin 2 | 257.408 | Asp26Asn | 143004808 | T = 60/C = 12284 | 0.0027 | 4.07 | 23 | 0.992 |
3 | 49158893 | C | T | LAMB2 | Laminin, beta 2 | 241.959 | Ala1745Thr | 142041381 | T = 5/C = 13001 | 0 | 5.34 | 58 | 1 |
20 | 6012009 | C | T | CRLS1 | Cardiolipin synthase 1 | 54.3269 | Pro119Leu | 0 | C = 13004 | 0 | 5.83 | 98 | 0.996 |
6 | 138428407 | G | A | PERP | TP53 apoptosis effector | 50.2039 | Ala24Val | 0 | G = 12832 | 0 | −2.97 | 64 | 0 |
X | 32509625 | A | C | DMD | Dystrophin | 41.8677 | Asn789Lys | 72468681 | C = 63/A = 10498 | 0.01 | 0.181 | 94 | 0.856 |
10 | 81109459 | G | C | PPIF | Peptidylprolyl isomerase F | 40.9854 | Gly89Arg | 145899672 | A = 3/G = 13003 | 0 | 5.4 | 125 | 1 |
2 | 44200942 | T | C | LRPPRC | Leucine-rich pentatricopeptide repeat containing | 35.1996 | Asn418Ser | 0 | C = 1/T = 13005 | 0 | 2.14 | 46 | 0.199 |
19 | 11617100 | C | T | ECSIT | ECSIT homolog | 26.5929 | Glu185Lys | 0 | C = 12994 | 0 | 5.4 | 56 | 0.999 |
19 | 11623977 | T | C | ECSIT | ECSIT homolog | 26.5929 | Asn211Ser | 202141211 | T = 13006 | 0 | 4.94 | 46 | 1 |
3 | 38645378 | G | T | SCN5A | Sodium channel, type V, alpha subunit | 26.2725 | Ala572Asp | 36210423 | T = 21/G = 12443 | 0 | 3.19 | 126 | 0.116 |
19 | 48257869 | C | T | GLTSCR2 | Glioma tumor suppressor candidate region gene 2 | 25.0259 | Thr284Met | 200463741 | T = 58/C = 12146 | 0.0027 | 1.65 | 81 | 0.927 |
3 | 33633938 | T | C | CLASP2 | Cytoplasmic linker associated protein 2 | 21.537 | Lys440Glu | 0 | T = 11976 | 0 | 5.68 | 56 | 0.525 |
9 | 131341997 | T | G | SPTAN1 | Spectrin, alpha, non-erythrocytic 1 | 21.2749 | Ser435Ala | 144787939 | G = 26/T = 12980 | 0 | 5.35 | 99 | 0.614 |
2 | 238280543 | C | T | COL6A3 | Collagen, type VI, alpha 3 | 21.1203 | Ala1373Thr | 112181324 | T = 12/C = 12994 | 0.0018 | −0.587 | 58 | 0.635 |
5 | 122135444 | A | G | SNX2 | Sorting nexin 2 | 20.0545 | Glu95Gly | 141745241 | G = 6/A = 13000 | 0 | 5.25 | 98 | 0 |
5 | 57755609 | G | C | PLK2 | Polo-like kinase 2 | 19.4331 | His60Asp | 140600076 | C = 14/G = 12940 | 0 | 5.26 | 81 | 0.008 |
9 | 140006432 | A | G | DPP7 | Dipeptidyl-peptidase 7 | 18.8162 | Met367Thr | 78671427 | G = 47/A = 12959 | 0.0018 | 3.97 | 81 | 0.946 |
2 | 39509689 | T | C | MAP4K3 | Mitogen-activated protein kinase 3 | 18.6804 | Ile511Val | 78142399 | C = 57/T = 12949 | 0.0014 | 5.21 | 29 | 0.007 |
6 | 31600314 | G | C | PRRC2A | Proline-rich coiled-coil 2A | 18.6379 | Glu1288Asp | 0 | G = 8436 | 0 | −2.26 | 45 | 0 |