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Table 3 Genotype frequencies of SLC10A2 tagging SNPs

From: Effects of common haplotypes of the ileal sodium dependent bile acid transporter gene on the development of sporadic and familial colorectal cancer: A case control study

Tagging SNP Variant Genotype frequency Armitage trend test
   Familial CRC Sporadic CRC 'Hyper-normal' controls  
rs279941 GG 0.74 0.82 0.76 *p = 0.78
  GT 0.25 0.17 0.22 #p = 0.27
  TT 0.01 0.01 0.02  
rs183963 AA 0.46 0.39 0.43 *p = 0.56
  AT 0.39 0.49 0.41 #p = 0.97
  TT 0.15 0.12 0.15  
rs157266 GG 0.74 0.80 0.76 *p = 0.87
  GA 0.25 0.19 0.19 #p = 0.23
  GT 0.01 0.02 0.05  
rs1886927 GG 0.81 0.84 0.82 *p = 0.98
  GT 0.19 0.15 0.17 #p = 0.67
  TT 0.00 0.01 0.01  
  1. * comparison of genotype frequencies between familial CRC and hypernormal controls
  2. # comparison of genotype frequencies between sporadic CRC and hypernormal controls