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Table 3 Pairwise SNP Analysis

From: The NEI/NCBI dbGAP database: Genotypes and haplotypes that may specifically predispose to risk of neovascular age-related macular degeneration

SNP

Interaction

Joint effect of SNP and rs2014307

Effect of SNP, controlling for rs2014307

Odds Ratio (95% C.I.)

Effect of rs2014307, controlling for SNP

Odds Ratio (95% C.I.)

rs800292

0.034082688

1.51E-06

0.0005

0.369(0.151–0.899)

0.0193

0.271(0.122–0.603)

rs572515

0.560883637

2.03E-10

0.0003

4.817(2.236–10.379)

3.7602E-06

0.233(0.096–0.562)

rs7529589

0.454600765

7.27E-09

0.0007

7.861(2.283–27.066)

0.0001

0.260(0.112–0.605)

rs1061170

0.597380515

2.22E-08

0.0007

6.831(2.113–22.079)

0.0002

0.258(0.111–0.600)

rs12038333

0.393546389

4.22E-08

0.0006

2.884(1.512–5.503)

0.0004

0.272(0.121–0.609)

rs203674

0.463309999

2.68E-09

0.0007

3.721(1.847–7.496)

0.0001

0.256(0.109–0.603)

rs10801575

0.808299262

1.49E-11

4.0182E-05

0.309(0.135–0.710)

0.0078

0.194(0.079–0.475)

rs1853883

0.760773267

9.31E-08

0.0004

2.448(1.355–4.421)

0.0021

0.263(0.117–0.589)

rs3790414

0.088493626

2.96E-06

0.0001

0.463(0.213–1.004)

0.0411

0.252(0.115–0.554)

rs1759016

0.873846771

9.04E-07

0.0001

0.490(0.266–0.902)

0.0244

0.246(0.111–0.545)

rs10922152

0.876195836

1.15E-07

0.0002

0.484(0.282–0.831)

0.0056

0.245(0.107–0.558)

rs10922153

0.518399094

2.99E-09

0.0006

0.413(0.232–0.736)

0.0052

0.259(0.110–0.606)

rs6663083

0.989583181

6.89E-08

0.0001

0.443(0.258–0.761)

0.0015

0.223(0.095–0.523)

rs2990510

0.487660055

4.62E-06

3.9350E-05

2.894(0.874–9.585)

0.0684

0.222(0.099–0.499)

rs6003

0.454199074

4.15E-07

0.0001

0.151(0.035–0.649)

0.0048

0.222(0.098–0.501)

rs1412632

0.396769175

5.61E-07

0.0001

0.164(0.038–0.697)

0.0066

0.226(0.100–0.509)

rs1412631

0.64561949

2.26E-07

0.0001

0.113(0.021–0.592)

0.0025

0.234(0.104–0.527)

rs12677

0.500827762

5.73E-07

0.0002

0.132(0.025–0.707)

0.0068

0.239(0.108–0.528)

rs4915337

0.313727331

1.02E-06

0.0001

0.176(0.040–0.782)

0.0127

0.239(0.108–0.528)

rs1888991

0.454199074

4.15E-07

0.0001

0.151(0.035–0.649)

0.0048

0.222(0.098–0.501)

rs6677082

0.454199074

4.15E-07

4.8640E-05

0.151(0.035–0.649)

0.0048

0.222(0.098–0.501)

rs6656448

0.707806912

1.10E-06

0.0001

0.224(0.062–0.809)

0.0136

0.236(0.106–0.525)

  1. Abbreviations: SNP, Single Nucleotide Polymorphism; C.I., Confidence Interval.