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Table 2 Minor allele frequencies for all SNPs genotyped in 1,345 FHS and 11,447 white ARIC participants

From: Genome-wide association study for renal traits in the Framingham Heart and Atherosclerosis Risk in Communities Studies

    n MAF
SNP gene location FHS ARIC white FHS ARIC white
Selected for low p-value only
rs4553158 MIER1 chr1:67148467 1,219 10,685 0.13 (G) 0.17 (G)
rs6831700 WDR19 chr4:39079530 1,273 10,808 0.34 (G) 0.33 (G)
rs2419912 (BC047601) chr5:157777113 1,341 10,817 0.49 (C) 0.46 (C)
rs2228210 HIVEP1 chr6:12230160 1,252 10,782 0.29 (G) 0.36 (G)
rs10509132 ANK3 chr10:61995671 1,223 10,783 0.45 (G) 0.48 (G)
rs1613631 KRT84 chr12:51062202 1,330 10,782 0.20 (G) 0.20 (G)
rs6495446 MTHFS chr15:77942037 1,328 10,816 0.24 (T) 0.27 (T)
rs2827732 gene desert chr21:23107838 1,344 10,768 0.19 (A) 0.16 (A)
Selected as a candidate
rs2061063 FRAS1 chr4:79591766 1,322 10,747 0.33 (G) 0.35 (G)
rs4835136 NR3C2 chr4:149627601 1,334 10,990 0.36 (T) 0.37 (T)
rs1743955 SGK1 chr6:134562589 1,299 10,763 0.42 (T) 0.39 (T)
rs4148686 CFTR chr7:116728468 1,225 10,795 0.17 (G) 0.20 (G)
rs3779748 EYA1 chr8:72410728 1,342 10,789 0.32 (C) 0.33 (C)
rs1455177 BC047388 chr9:3782613 1,337 10,434 0.45 (G) 0.45 (G)
rs10520688 IQGAP1 chr15:88752520 1,331 10,814 0.15 (G) 0.14 (G)
rs2839235 PCNT chr21:46625020 1,300 10,799 0.14 (C) 0.13 (C)
  1. To facilitate interpretation, alleles were transferred to the strand typed in ARIC if they were typed on the opposite strand in FHS. The sample size n presented here is for all successfully genotyped individuals irrespective of whether all covariates for regression analyses were available. Abbreviations: SNPs: single nucleotide polymorphisms, n: sample size, MAF: minor allele frequency.