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Table 1 Scored polymorphisms of LHB and LHCGR.

From: A luteinizing hormone receptor intronic variant is significantly associated with decreased risk of Alzheimer's disease in males carrying an apolipoprotein E ε4 allele

Gene

Designation

dbSNP reference ID

Location

Type

LHB

lhb1

rs3956233

Intron 1

Intronic SNP

 

lhb2

rs4002462

Intron 1

Intronic SNP

 

*

rs5030775a

Exon 2 (signal peptide)

Non-synonymous SNP

 

lhb3

rs1800447

Exon 2 (vLH SNP 1)

Non-synonymous SNP

 

**

(rs1800447)b

Exon 2 (vLH SNP 2)

Non-synonymous SNP

 

lhb4

rs6521

Exon 2

Synonymous SNP

 

lhb5

rs1056914

Exon 2

Synonymous SNP

 

lhb6

rs2387588

Intron 2

Intronic SNP

 

lhb7

rs4287687

Intron 2

Intronic SNP

LHR

lhcgr1

rs4539842

Exon 1

6 base insertion/deletion

 

lhcgr2

rs4073366

Intron 1

Intronic SNP

 

lhcgr3

rs12470652

Exon 10

Non-synonymous SNP

 

lhcgr4

rs2293275

Exon 10

Non-synonymous SNP

 

lhcgr5

rs13006488

Exon 11

Synonymous SNP

  1. ars5030775 not included in analyses, as it was invariant in our cohort
  2. bsecond vLH position not included in analyses since it is in complete linkage disequilibrium with lhb3