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Table 2 Haplotypes and haplotype frequencies in haploblock 1 as defined by default settings using Haploview version 3.2

From: Genetic association study of synphilin-1in idiopathic Parkinson's disease

Haplotype block association

Haplotype

Haploblock 1

MAF

Chi-square

p-value

GAAT

Haplotype A

0.35

0.13

0.72

GCAT

Haplotype B

0.34

0.18

0.67

AAGC

Haplotype C

0.28

0.01

0.93

AAGT

Haplotype D

0.02

0.35

0.55

  1. Highly polymorphic markers were used for single marker (table 1) and haplotype association analysis. MAF-Minor allele frequency. P-values calculated using 10 000 permutations.
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BMC Medical Genetics

ISSN: 1471-2350

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