From: Genome-wide association with select biomarker traits in the Framingham Heart Study
Gene | rs number previous reports | # Affy SNPs within 60 kb | rs ID Affy SNPs | Chr | D' | r2 | Distance Associated SNP | MAF | FBAT p-value | GEE p-value |
---|---|---|---|---|---|---|---|---|---|---|
IL6 | rs1800795 = -174G/C | 7 | rs6461667 | 7 | 1 | 0.82 | 30098 | 0.36 | 0.09 | 0.66 |
MCP1 | rs1024611 | 13 | rs10491109 | 17 | 1 | 0.04 | 30762 | 0.15 | 0.048 | 0.13 |
 |  |  | rs1080327 |  | 1 | 0.96 | 11878 | 0.25 | 0.78 | 0.35 |
 |  |  | rs1860181 |  | 0.92 | 0.27 | 37799 | 0.45 | 0.04 | 0.11 |
 |  |  | rs1860182 |  | 0.92 | 0.27 | 37649 | 0.45 | 0.046 | 0.11 |
 |  |  | rs3815341 |  | 1 | 0.02 | 34637 | 0.05 | 0.001 | 0.50 |
CRP average 2,6,7 | rs1205 | 37 | rs1446959 | 1 | 0.56 | 0.12 | 75429 | 0.39 | 0.86 | 0.002 |
 |  |  | rs1891187 |  | 0.39 | 0.05 | 53180 | 0.33 | 0.30 | 0.02 |
 |  |  | rs2808629 |  | 1 | 1 | 5437 | 0.34 | 4.8*105 | 3.2*10-8 |
 |  |  | rs2794520 |  | 1 | 1 | 3417 | 0.34 | 4.3*10-5 | 2.8*10-8 |
 |  |  | rs4131568 |  | 0.63 | 0.12 | 39823 | 0.30 | 0.004 | 0.001 |
 | rs1417938 |  | rs1446959 |  | 0.5 | 0.16 | 77382 | 0.39 | 0.86 | 0.002 |
 |  |  | rs1891187 |  | 0.29 | 0.07 | 55133 | 0.33 | 0.30 | 0.02 |
 |  |  | rs2808629 |  | 1 | 0.25 | 7390 | 0.34 | 4.8*10-5 | 3.2*10-8 |
 |  |  | rs2794520 |  | 1 | 0.25 | 5370 | 0.34 | 4.3*10-5 | 2.8*10-8 |
 |  |  | rs4131568 |  | 1 | 0.83 | 37870 | 0.30 | 0.004 | 0.001 |
 |  |  | rs1446959 |  | 0.66 | 0.03 | 72832 | 0.39 | 0.86 | 0.002 |
 | rs3093077 |  | rs1891187 |  | 0.47 | 0.02 | 50583 | 0.33 | 0.30 | 0.02 |
 |  |  | rs2808629 |  | 1 | 0.03 | 2840 | 0.34 | 4.8*10-5 | 3.2*10-8 |
 |  |  | rs2794520 |  | 1 | 0.03 | 820 | 0.34 | 4.3*10-5 | 2.8*10-8 |
 |  |  | rs4131568 |  | 1 | 0.03 | 42420 | 0.30 | 0.004 | 0.001 |
 |  |  | rs1446959 |  | 0.51 | 0.17 | 90106 | 0.39 | 0.86 | 0.002 |
 | rs3116653 |  | rs1891187 |  | 0.31 | 0.08 | 67857 | 0.33 | 0.30 | 0.02 |
 |  |  | rs2808629 |  | 1 | 0.25 | 20114 | 0.34 | 4.8*10-5 | 3.2*10-8 |
 |  |  | rs2794520 |  | 1 | 0.25 | 18094 | 0.34 | 4.3*10-5 | 2.8*10-8 |
 |  |  | rs4131568 |  | 1 | 0.83 | 25146 | 0.30 | 0.004 | 0.001 |