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Table 6 Estimation of the haplotype frequency distribution of the G1522A variant and hexanucleotide repeat polymorphism in the SMPD1 gene in low HDL-C and control subjects.

From: Sphingomyelin phosphodiesterase-1 (SMPD1) coding variants do not contribute to low levels of high-density lipoprotein cholesterol

Haplotype

Total (%)

Controls subjects (%)

Low HDL-C subjects (%)

5 G

5.5

5.8

4.7

5 A

0.4

0.5

0.1

6 G

23.3

22.7

24.5

6 A

22.4

23.1

21.1

7 G

46.9

45.8

48.9

7 A

0.8

1.2

0.2

8 G

0.2

0.2

0.0

9 G

0.4

0.4

0.4

10 G

0.2

0.2

0.0

  1. p-value for testing H0: cases ~ controls = 0.5.