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Table 2 Frequency of the different SNP genotypes and alleles in the population studied

From: Matrix Metalloproteinase-9 (MMP-9) polymorphisms in patients with cutaneous malignant melanoma

Minor Allele

n*

Polymorphism

Reference ID

Frequency (n*)

Allele Frequency

< 5%

538

N127K (C > G)

rs3918252

NN: 1.000 (538)

N: 1.000

    

NK: 0.000 (0)

 
    

KK: 0.000 (0)

K: 0.000

    

N/A: -- (0)

 
  

D165N (G > A)

rs8125581

DD: 1.000 (537)

D: 1.000

    

DN: 0.000 (0)

 
    

NN: 0.000 (0)

N: 0.000

    

N/A: -- (1)

 
  

P574R (C > G)

rs2250889

PP: 0.910 (485)

P: 0.954

    

PR: 0.088 (47)

 
    

RR: 0.002 (1)

R: 0.046

    

N/A: -- (5)

 

> 5%

1002

(-)1562 C > T

rs3918242

CC: 0.721 (716)

C: 0.852

    

CT: 0.262 (260)

 
    

TT: 0.017 (17)

T: 0.148

    

N/A: -- (17)

 
  

Q279R (A > G)

rs2664538

QQ: 0.420 (420)

Q: 0.645

    

QR: 0.451 (451)

 
    

RR: 0.130 (130)

R: 0.355

    

N/A: -- (1)

 
  

R668Q (G > A)

rs2274756

RR: 0.718 (716)

R: 0.850

    

RQ: 0.263 (262)

 
    

QQ: 0.019 (19)

Q: 0.150

    

N/A: -- (5)

 
  1. *Total number of patients genotyped; N/A: not available due to genotyping failures