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Table 3 Haplotypes constructed with 23 SNPs in the PI3 gene.

From: Identification of novel functional sequence variants in the gene for peptidase inhibitor 3

Haplotype

Frequency

SDa

-1077A>Gb

-1067A>Gb

-1063G>A

-960T>Delb

-911G>A

-868C>G

-689C>Gb

-675C>Tb

-453T>G

-338G>Ab

-258A>G

+50C>Tb

+145C>Ab

+162T>A

+404C>G

+408C>Tb

+569C>G

+627A>Gb

+751T>A

+959A>Cb

+1123C>T

+1226C>Ab

+1234C>Ab

PI3_A

0.042

0.0318

A

A

A

T

G

C

C

C

T

G

A

C

C

T

C

C

C

A

A

A

C

C

C

PI3_B

0.021

0.0258

A

A

A

T

G

C

C

C

T

G

A

C

C

T

C

C

C

A

T

A

C

C

C

PI3_C

0.021

0.0154

A

A

A

T

G

C

C

C

T

G

A

C

C

T

G

C

C

A

A

A

C

C

C

PI3_D

0.021

0.0132

A

A

G

T

A

C

C

C

T

G

A

C

C

T

C

C

G

A

T

A

C

C

C

PI3_E

0.021

0.0188

A

A

G

T

G

C

C

C

G

G

A

C

C

A

C

C

C

A

T

A

C

C

C

PI3_F

0.437

0.1006

A

A

G

T

G

C

C

C

T

G

A

C

C

A

C

C

C

A

T

A

C

C

C

PI3_G

0.021

0.0209

A

A

G

T

G

C

C

C

T

G

A

C

C

A

C

C

G

A

T

A

C

C

C

PI3_H

0.125

0.0896

A

A

G

T

G

C

C

C

T

G

A

C

C

T

C

C

C

A

T

A

C

C

C

PI3_I

0.042

0.0355

A

A

G

T

G

C

C

C

T

G

A

C

C

T

G

C

C

A

T

A

C

C

C

PI3_J

0.021

0.0199

A

A

G

T

G

G

C

C

T

G

A

C

C

T

C

C

C

A

T

A

C

C

C

PI3_K

0.083

0.0458

A

A

G

T

G

G

C

C

T

G

A

C

C

T

C

C

G

A

T

A

C

C

C

PI3_L

0.021

0.0156

A

A

G

T

G

G

C

C

T

G

A

C

C

T

C

C

G

G

T

A

C

C

C

PI3_M

0.063

0.0328

G

G

G

Del

G

C

G

T

T

A

A

T

A

T

C

T

C

G

T

C

C

A

A

PI3_N

0.021

0.0177

G

G

G

Del

G

C

G

T

T

A

A

T

A

T

C

T

C

G

T

C

T

A

A

PI3_O

0.021

0.0201

G

G

G

Del

G

C

G

T

T

A

A

T

A

T

G

T

C

G

T

C

C

A

A

PI3_P

0.021

0.0176

G

G

G

Del

G

C

G

T

T

A

G

T

A

T

C

T

C

G

T

C

C

A

A

  1. aStandard deviation.
  2. bThese SNP loci are in complete linkage disequilibrium with each other.