Published SNP | Set 1 and 2 families | Cases and controls | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
 | MAF | N parent-child trios (T/NT) | PTDT | Allelic RR [95% CI] | Genotype RR [95% CI] | MAF | N Cases/controls | P1df | Allelic OR [95%CI] | Genotype OR [95%CI] |
IL1RN +2017 T>C rs2419598 | 0.28 | 1418 (916/865) | 0.23 | 1.06 [0.96–1.16] | T/T 1.00 [ref] T/C 1.12 [0.99–1.25] C/C 1.03 [0.83–1.28] | n/a | n/a | n/a | n/a | n/a |
IL1RA -889 C>T rs1800587 | 0.30 | 1431 (925/913) | 0.78 | 1.01 [0.92–1.11] | C/C 1.00 [ref] C/T 1.02 [0.91–1.15] T/T 1.02 [0.83–1.25] | n/a | n/a | n/a | n/a | n/a |
CARD15 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
SNP8 +2023C>T rs2066844 | 0.03 | 252 (123/143) | 0.22 | 0.86 [0.68–1.09] | C/C 1.00 [ref] C/T 0.90 [0.70–1.15] T/T 0.22 [0.03–1.66] | n/a | n/a | n/a | n/a | n/a |
SNP12 +3641G>C rs2066845 | 0.01 | 127 (57/72) | 0.19 | 0.79 [0.56–1.12] | G/G 1.00 [ref] G/C 0.81 [0.57–1.14] C/C - | n/a | n/a | n/a | n/a | n/a |
SNP13 +2936insC ss28514842 | 0.01 | 143 (73/72) | 0.93 | 1.01 [0.73–1.40] | 1/1 1.00 [ref] 1/2 1.00 [0.72–1.38] 2/2 2.99 [0.19–48.22] | n/a | n/a | n/a | n/a | n/a |
IGR2198 G>C rs11739135 | 0.40 | 1511 (988/1008) | 0.65 | 0.98 [0.90–1.07] | G/G 1.00 [ref] G/C 0.95 [0.84–1.07] C/C 0.98 [0.82–1.17] | n/a | n/a | n/a | n/a | n/a |
SLC22A4 G>A rs3792876 | n/a | n/a | n/a | n/a | n/a | 0.08 | 3303/3558 | 0.93 | 0.99 [0.87–1.14] | C/C 1.0 [ref] C/T 1.01 [0.87–1.16] T/T 0.83 [0.40–1.70] |
SLC22A4 C>T rs2073838 | n/a | n/a | n/a | n/a | n/a | 0.08 | 3290/3549 | 0.79 | 0.98 [0.86–1.12] | G/G 1.00 [ref] G/A 1.00 [0.87–1.15] A/A 0.74 [0.36–1.52] |
LAG3 G>A rs870849 | n/a | n/a | n/a | n/a | n/a | 0.36 | 3860/4297 | 0.90 | 1.00 [0.93–1.06] | G/G 1.00 [ref] G/A 1.00 [0.91–1.10] A/A 0.99 [0.86–1.14] |