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Table 3 Raw Counts for Caucasian and African American Case Control Studies

From: Insulin Promoter Factor 1 variation is associated with type 2 diabetes in African Americans

SNP Name

Caucasian

African American

 

Major/Major

Major/Minor

Minor/Minor

Major/Major

Major/Minor

Minor/Minor

 

DM

Cnt

DM

CNT

DM

CNT

DM

CNT

DM

CNT

DM

CNT

SNP 1

120

124

54

59

6

7

249

117

84

60

7

9

SNP 2

54

61

97

95

38

34

197

124

53

35

2

3

SNP 3

97

73

15

108

71

12

---

---

---

---

---

---

SNP 4

84

82

43

76

89

26

169

147

25

79

75

31

SNP 5

---

---

---

---

---

---

210

143

34

14

1

0

SNP 6

124

125

56

58

7

9

200

119

53

43

2

3

SNP 8

123

123

56

58

9

7

198

115

50

41

2

3

SNP 11

125

8

51

125

53

6

253

114

76

57

7

11

ProIns

---

---

---

---

---

---

265

57

1

155

21

0

  1. Numbers of individuals with each genotype are shown for the SNPs in Table 1. Significance by allelic association is shown in Table 1 with confidence intervals for allele frequencies. Note that allelic association was the primary test performed. Data not shown (--) was not typed in the full case control set because of low frequency. Counts differ slightly due to genotypes that were not called, and because additional African American samples were typed for SNPs 1, 4, 11, and ProIns (proline insertion) based on initial data showing an association.