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Table 1 Taqman probes used for cytokine genotyping

From: Association study of functional genetic variants of innate immunity related genes in celiac disease

Polymorphism

Taqman probe sequence

IL-1A -889 C/T (rs1800587)

VIC – CCTTCAATGGTGTTGCC

 

FAM – CCTTCAATGATGTTGCC

IL-1B -551 C/T (rs1143627)

VIC – CTGTTTTTATGGCTTTCA

 

FAM – CTGTTTTTATAGCTTTCA

IL-18 -607 C/A (rs1946518)

VIC – ATCATTAGAATTTTATGTAATAAT

 

FAM – ATCATTAGAATTTTATTTAATAAT

IL-18 -137 G/C (rs187238)

VIC – ACTATTTTCATGAAATCTTTTCT

 

FAM – TTTTCATGAAATGTTTTCT

RANTES -28 G/C (rs2280788)

VIC – CCCCTCAACTGGC

 

FAM – CCCCTGAACTGGC

MCP-1 -2518 G/A (rs1024611)

VIC – CAGACAGCTGTCACTTT

 

FAM – CAGACAGCTATCACTTT