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Table 2 Genes with decreased levels of expression in at least 3 of 4 mutant MeCP2 expressing clonal fibroblast cell strains when compared to matched clonal wild type MeCP2 expressing cell strains
| GenBank Accession | Expression In Brain | Gene Symbol/UniGene No. | Gene Name | Function |
|---|---|---|---|---|
| AC003107 | COMP | Cartilage oligomeric matrix protein | extracellular matrix protein | |
| L32137 | COMP | Cartilage oligomeric matrix protein | extracellular matrix protein | |
| U59289 | x | CDH13 | Cadherin 13, H-cadherin | cell adhesion |
| X53586 | x | ITGA6 | Integrin, alpha 6 | cell adhesion |
| AI815057 | KLF5 | Kruppel-like factor 5 | transcriptional regulation of cellular proliferation | |
| D43969 | x | RUNX1 | Runt-related transcription factor 1 | transcription factor |
| L27560 | x | IGFBP5 | insulin-like growth factor binding protein 5 | growth homeostasis |
| AW022852 | x | IGFBP5 | insulin-like growth factor binding protein 5 | growth homeostasis |
| AI433710 | x | Hs.25557 | plasma-cell membrane glycoprotein PC-1a | nucleotide phosphatase |
| AA142891 | x | P4HA2 | prolyl 4-hydroxylase (alpha subunit)a | hydroxylase |
| U38810 | x | MAB21L1 | Mab-21-like | eye and cerebellum development |
| Y00815 | x | PTPRF | protein tyrosine phosphatase, receptor type, F | cell signaling |
| AI017574 | x | CRIP1 | Cysteine-rich protein 1 | zinc carrier protein |
| AI862775 | x | Hs.66915 | sphingolipid G-protein-coupled receptor, 5a | endothelial differentiation |
| AL035494 | Hs.184736 | |||
| AI125670 | x | Hs.16346 | ||
| AI718385 | x | Hs.302738 | ||
| AI818579 | Hs.121520 | |||
| AI597757 | Hs.207407 | |||
| AI935827 | Hs.169758 | |||
| AB018289 | Hs.49500 |
