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Table 2 Genes with decreased levels of expression in at least 3 of 4 mutant MeCP2 expressing clonal fibroblast cell strains when compared to matched clonal wild type MeCP2 expressing cell strains

From: Gene expression patterns vary in clonal cell cultures from Rett syndrome females with eight different MECP2 mutations

GenBank Accession Expression In Brain Gene Symbol/UniGene No. Gene Name Function
AC003107   COMP Cartilage oligomeric matrix protein extracellular matrix protein
L32137   COMP Cartilage oligomeric matrix protein extracellular matrix protein
U59289 x CDH13 Cadherin 13, H-cadherin cell adhesion
X53586 x ITGA6 Integrin, alpha 6 cell adhesion
AI815057   KLF5 Kruppel-like factor 5 transcriptional regulation of cellular proliferation
D43969 x RUNX1 Runt-related transcription factor 1 transcription factor
L27560 x IGFBP5 insulin-like growth factor binding protein 5 growth homeostasis
AW022852 x IGFBP5 insulin-like growth factor binding protein 5 growth homeostasis
AI433710 x Hs.25557 plasma-cell membrane glycoprotein PC-1a nucleotide phosphatase
AA142891 x P4HA2 prolyl 4-hydroxylase (alpha subunit)a hydroxylase
U38810 x MAB21L1 Mab-21-like eye and cerebellum development
Y00815 x PTPRF protein tyrosine phosphatase, receptor type, F cell signaling
AI017574 x CRIP1 Cysteine-rich protein 1 zinc carrier protein
AI862775 x Hs.66915 sphingolipid G-protein-coupled receptor, 5a endothelial differentiation
AL035494   Hs.184736   
AI125670 x Hs.16346   
AI718385 x Hs.302738   
AI818579   Hs.121520   
AI597757   Hs.207407   
AI935827   Hs.169758   
AB018289   Hs.49500   
  1. aIdentified in Celera database