SNP ID | Genotype | Genotype frequency (%) | OR (95% CI) | P-value* | Allele | Allele frequency (%) | OR (95% CI) | P-value* | ||
---|---|---|---|---|---|---|---|---|---|---|
Control | Patient | Control | Patient | |||||||
rs6055363 | A/A | 44.8 | 32 | 1.00 | 0.06 | A | 67.6 | 57 | 1.00 | 0.0265 |
A/G, G/G | 55.2 | 68 | 1.72 (0.97-3.04) | G | 32.4 | 43 | 1.57 (1.05-2.36) | |||
rs2294305 | A/A | 43.8 | 31 | 1.00 | 0.058 | A | 66.7 | 56.5 | 1.00 | 0.0343 |
A/G, G/G | 56.2 | 69 | 1.74 (0.98-3.08) | G | 33.3 | 43.5 | 1.54 (1.03-2.30) | |||
rs2235250 | G/G | 44.8 | 31.7 | 1.00 | 0.053 | G | 68.1 | 55.9 | 1.00 | 0.0110 |
G/A, A/A | 55.2 | 68.3 | 1.75 (0.99-3.09) | A | 31.9 | 44.1 | 1.68 (1.12-2.51) | |||
rs6077285 | C/C | 28 | 46.9 | 1.00 | 0.0057 | C | 57.5 | 66.8 | 1.00 | 0.0555 |
C/G, G/G | 72 | 53.1 | 0.44 0(0.24-0.79) | G | 42.5 | 33.2 | 0.67 (0.45-1.01) | |||
rs2294301 | C/C | 34.3 | 53.5 | 1.00 | 0.0054 | C | 60 | 69.8 | 1.00 | 0.0373 |
C/G, G/G | 65.7 | 46.5 | 0.45 0(0.26-0.80) | G | 40 | 30.2 | 0.65 (0.43-0.98) | |||
rs2423326 | G/G | 34.3 | 54.5 | 1.00 | 0.0035 | G | 60 | 72.8 | 1.00 | 0.0061 |
G/A, A/A | 65.7 | 45.5 | 0.44 0(0.25-0.77) | A | 40 | 27.2 | 0.56 (0.37-0.85) | |||
rs6118004 | T/T | 33.3 | 58 | 1.00 | 0.0004 | T | 60 | 74.5 | 1.00 | 0.0018 |
T/C, C/C | 66.7 | 42 | 0.36 0(0.21-0.64) | C | 40 | 25.5 | 0.51 (0.34-0.78) | |||
rs2205818 | A/A | 35.2 | 57.4 | 1.00 | 0.0013 | A | 61.9 | 74.3 | 1.00 | 0.0072 |
A/G, G/G | 64.8 | 42.6 | 0.40 (0.23-0.71) | G | 38.1 | 25.7 | 0.56 (0.37-0.86) | |||
rs2142697 | T/T | 34 | 56.6 | 1.00 | 0.0012 | T | 61.2 | 74.2 | 1.00 | 0.0050 |
T/C, C/C | 66 | 43.4 | 0.40 (0.22-0.70) | C | 38.8 | 25.8 | 0.55 (0.36-0.83) | |||
rs6140463 | G/G | 35.2 | 58 | 1.00 | 0.001 | G | 61.4 | 74.5 | 1.00 | 0.0046 |
G/A, A/A | 64.8 | 42 | 0.39 (0.22-0.69) | A | 38.6 | 25.5 | 0.54 (0.36-0.83) | |||
rs2235245 | C/C | 35.2 | 58.4 | 1.00 | 0.0008 | C | 61.4 | 75.2 | 1.00 | 0.0026 |
C/G, G/G | 64.8 | 41.6 | 0.39 (0.22-0.68) | G | 38.6 | 24.8 | 0.52 (0.34-0.80) | |||
rs6086287 | A/A | 72.4 | 58.4 | 1.00 | 0.035 | A | 84.8 | 77.2 | 1.00 | 0.0510 |
A/C, C/C | 27.6 | 41.6 | 1.87 (1.04-3.34) | C | 15.2 | 22.8 | 1.64 (0.99-2.70) | |||
rs2255183 | T/T | 71.4 | 56.4 | 1.00 | 0.025 | T | 84.3 | 76.2 | 1.00 | 0.0399 |
T/C, C/C | 28.6 | 43.6 | 1.93 (1.08-3.44) | C | 15.7 | 23.8 | 1.67 (1.02-2.74) |