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Table 2 Indeterminate sequence changes of PKD genes identified by HRM and direct sequencing in a set of patients from the Czech population

From: Novel mutations of PKD genes in the Czech population with autosomal dominant polycystic kidney disease

Family

Gene/exon/intron

Nucleotide change

Amino acid change/predicted effect

Predicted location within PKD domains

Reference

308 INDET.

PKD1/15

c.3602C > T

p.Ala1201Val

PKD repeats

Novel

412 INDET.

PKD1/29

c.9718G > A

p.Ala3240Thr

Not defined

Novel

409 INDET.

PKD1/IVS42

c.11712 + 8C > A

Probable splice defect

N/A

Novel

466 INDET.

PKD2/IVS 9

c.2019 + 9A > C

Probable splice defect

N/A

Novel

  1. cDNA numbering is based on the reference database: Autosomal Dominant Polycystic Kidney Disease Mutation Database (PKDB) (http://pkdb.mayo.edu). INDET. indeterminate patients (the linkage of ADPKD to PKD1 gene has not been proved); IVS the intronic sequence; Current paper mutation was not described in the Autosomal Dominant Polycystic Kidney Disease Mutation Database (PKDB) (http://pkdb.mayo.edu) and/or in the Human Gene Mutation Database (HGMD) (http://www.hgmd.cf.ac.uk). The potential location of mutations has been established on the basis of theoretical models of polycystins by UniProtKB/Swiss-Prot database (PKD1: P98161, PKD2:Q13563). As not defined are called sequences within PKD proteins with unknown domain structure.