|
Tumor
|
iFISH Karyotype
|
Chromosome 22 status by SNP arrays* (n = 6206)
|
|---|
|
ID
|
Chromosome 22 status
|
Copy number values
|
N. of SNPs with LOH/N. of informative SNPs (%)
|
|---|
|
M20
|
−22q
|
−22
|
1.35 (1.01-1.93)
|
108
|
/ 1326 (8%)
|
|
M18
|
−22q
|
−22
|
1.19 (0.76-1.59)
|
365
|
/ 1131 (32%)
|
|
M15
|
Complex & -22q
|
−22
|
1.30 (0,85-2,03)
|
454
|
/ 1158 (39%)
|
|
M14
|
−22q
|
−22
|
1.34 (0.95-1.77)
|
80
|
/ 1472 (5%)
|
|
M13
|
−22q
|
−22
|
1.24 (0.92-1.8)
|
920
|
/ 1188 (77%)
|
|
M11
|
Complex & -22q
|
−22
|
1.20 (0.91-1.91)
|
694
|
/ 1043 (67%)
|
|
M16
|
−22q
|
−22
|
1.27 (0.81-1.75)
|
209
|
/ 1340 (16%)
|
|
M7
|
−22q,-Y
|
−22
|
1.52 (1.08-2.14)
|
18
|
/ 1505 (1%)
|
|
M12
|
Complex & del(22q)
|
del(22q11.22-qter)
|
1.50 (0.98-2)
|
19
|
/ 1683 (2%)
|
|
M6
|
Complex & del(22q)
|
del(22q11.22-qter)
|
1.34 (0.8-2.55)
|
763
|
/ 1195 (64%)
|
|
M19
|
Complex
|
Diploid
|
1.58 (1.12-2.06)
|
7
|
/ 1630 (0.4%)
|
|
M10
|
Complex
|
Diploid
|
1.71 (1.09-2.31)
|
9
|
/ 1770 (0.5%)
|
|
M9
|
Diploid
|
Diploid
|
1.75 (1.27-2.32)
|
3
|
/ 1712 (0.2%)
|
|
M8
|
Diploid
|
Diploid
|
1.92 (1.6-2.39)
|
5
|
/ 1681 (0.3%)
|
|
M5
|
Diploid
|
Diploid
|
1.79 (1.28-2.3)
|
3
|
/ 1696 (0.2%)
|
- *LOH and copy number analyses involved 6206 SNP localized along the entire chromosome 22.
-
iFISH interphase fluorescence in situ hybridization, SNP single nucleotide polymorphism, LOH loss of heterozigosity.
