From: Transferability and Fine Mapping of genome-wide associated loci for lipids in African Americans
SNP | Chr | Position | Minor Allele(Freq HUFS, Freq CEU) | Nearby Gene | Trait | HUFS | Previous Report | ||
---|---|---|---|---|---|---|---|---|---|
Beta (SE) | P-value | Beta (SE) | P-value | ||||||
rs10401969 | 19 | 19268718 | G (0.17, 0.10) | CILP2/SF4 | TG | −8.3 (2.8) | 0.006 | −7.8 (0.8) | 1.6 x 10-29 |
rs11869286 | 17 | 35067382 | G (0.26, 0.68) | STARD3 | HDL | 2.1 (0.9) | 0.02 | −0.5 (0.08)2 | 2.8 x 10-14 |
rs12678919 | 8 | 19888502 | G (0.11, 0.12) | LPL | TG | −9.0 (4.4) | 0.01 | −13.6 (0.6) | 1.5 x 10-115 |
rs2081687 | 8 | 59551119 | T (0.22, 0.33) | CYP7A1 | LDL | 5.2 (2.5) | 0.04 | 0.95 (0.2) | 3.9 x 10-9 |
rs2131925 | 1 | 62798530 | T (0.37, 0.68) | ANGPTL3 | TC | 4.5 (2.3) | 0.04 | −2.6 (0.2)2 | 4.9 x 10-41 |
rs4420638 | 19 | 50114786 | C (0.21, 0.18) | APOE | HDL | −2.3 (0.9) | 0.02 | −1.1 (0.1) | 4.4 x 10-21 |
rs629301 | 1 | 109619829 | G (0.36, 0.30) | SORT1 | LDL | −5.4 (1.9) | 0.005 | −5.7 (0.2) | 9.7 x 10-171 |